RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 TMEM14AQ9Y6G1 99 aa2.31□□□□□ -2.04
SLIRP-202ENST00000553981 IGKV1-6A0A0C4DH72 117 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 hDV102S1A0JD36 115 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 PPP5D1E7EU14 171 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 J3QLW9 94 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 AIPO00170 330 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 RTL8CO15255 209 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 SULT1B1O43704 296 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 ORC5O43913 435 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 GMNNO75496 209 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 SC5DO75845 299 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 GAGE7O76087 117 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 OR7C1O76099 320 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 BAG2O95816 211 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 FADS2O95864 444 aaKnown RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 TRGV3P03979 118 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 HTR1AP08908 422 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 CD3GP09693 182 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 UBCP0CG48 685 aaKnown RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 GAGE12FP0CL80 117 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 GAGE12GP0CL81 117 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 GAGE12IP0CL82 117 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 MYOD1P15172 320 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF19P17023 458 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 SERPINA2P20848 420 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 PRKACBP22694 351 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 FCGR2BP31994 310 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 CCR9P51686 369 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 BRWD1-AS2P59051 145 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 TPPP2P59282 170 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 CD81P60033 236 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 GAGE1Q13065 139 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 GAGE4Q13068 117 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 PLA2G7Q13093 441 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 RIPK1Q13546 671 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 INSL4Q14641 139 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 HMGN3Q15651 99 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 FAM98BQ52LJ0 330 aaKnown RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 NHLRC3Q5JS37 347 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 TMEM244Q5VVB8 128 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF660Q6AZW8 331 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 DMKNQ6E0U4 476 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 OR10K2Q6IF99 312 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF343Q6P1L6 599 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF880Q6PDB4 577 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 CEMP1Q6PRD7 247 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 UNQ5815/PRO19632Q6UWF5 114 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 SATL1Q86VE3 508 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 PPP1R27Q86WC6 154 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 SGPP2Q8IWX5 399 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF383Q8NA42 475 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 DRAXINQ8NBI3 349 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 CHST4Q8NCG5 386 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 OR13C3Q8NGS6 347 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 OR52N1Q8NH53 320 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 KCNG3Q8TAE7 436 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 TNFAIP8L1Q8WVP5 186 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 APH1BQ8WW43 257 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 LGALS12Q96DT0 336 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 NSL1Q96IY1 281 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 OR4C12Q96R67 309 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 SULT4A1Q9BR01 284 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 NICN1Q9BSH3 213 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 HDHD3Q9BSH5 251 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 THTPAQ9BU02 230 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 BARHL1Q9BZE3 327 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 GABARAPL1Q9H0R8 117 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 BANF2Q9H503 90 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 PLEKHA2Q9HB19 425 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 TAF9BQ9HBM6 251 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 NEK6Q9HC98 313 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 AMBNQ9NP70 447 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 PCDHB16Q9NRJ7 776 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 MRGBPQ9NV56 204 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 OR1A1Q9P1Q5 309 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 ZMAT5Q9UDW3 170 aaKnown RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 WARS2Q9UGM6 360 aaKnown RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 MLXQ9UH92 298 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 ZNF230Q9UIE0 474 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 ING4Q9UNL4 249 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 POMPQ9Y244 141 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 FOXA2Q9Y261 457 aaPredicted RBP2.3□□□□□ -2.04
SLIRP-202ENST00000553981 PAM16Q9Y3D7 125 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 S4R3C0 116 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 HERC1Q15751 4861 aa2.3□□□□□ -2.04
SLIRP-202ENST00000553981 TRBV5-5A0A0J9YX44 114 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 A0A1W2PPK0 400 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 TMEM30CPA0ZSE6 113 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 TMEM213A2RRL7 107 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 FUOMA2VDF0 154 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 HMX3A6NHT5 357 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 FAM90A7PA6NKC0 464 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 FOXI3A8MTJ6 420 aaPredicted RBP2.29□□□□□ -2.04
SLIRP-202ENST00000553981 FAM90A23PA8MXZ1 464 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 OR11H12B2RN74 326 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 YPEL1O60688 119 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 SERPINA3P01011 423 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 IGHV3-23P01764 117 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 TFAP2AP05549 437 aa2.29□□□□□ -2.04
SLIRP-202ENST00000553981 LIMS3P0CW19 117 aa2.29□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms