RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 MALSU1Q96EH3 234 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 C14orf144Q96I85 54 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TSPAN32Q96QS1 320 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 ANAPC13Q9BS18 74 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 MND1Q9BWT6 205 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 Q9H3A6 140 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 JPT2Q9H910 190 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 MED11Q9P086 117 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 FLVCR1Q9Y5Y0 555 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TONSLQ96HA7 1378 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 RREB1Q92766 1687 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 ROBO3Q96MS0 1386 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 A0A1B0GUV1 79 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 POP7O75817 140 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 PIAS1O75925 651 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TNFSF15O95150 251 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 C8GP07360 202 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 OR4Q2P0C623 313 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 LHX2P50458 406 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TNFAIP6P98066 277 aaPredicted RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 LTC4SQ16873 150 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 RNASE10Q5GAN6 216 aaKnown RBP3.12□□□□□ -1.91
USP44-208ENST00000552440 SMIM29Q86T20 159 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TMEM86AQ8N2M4 240 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 OR52P1PQ8NH57 321 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 TMEM101Q96IK0 257 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 C20orf27Q9GZN8 174 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 PBOV1Q9GZY1 135 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 SLC23A2Q9UGH3 650 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 ANAPC10Q9UM13 185 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 FIS1Q9Y3D6 152 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 PRSS21Q9Y6M0 314 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 U3KQ87 197 aa3.12□□□□□ -1.91
USP44-208ENST00000552440 NUP188Q5SRE5 1749 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 EIF2AK4Q9P2K8 1649 aaKnown RBP3.11□□□□□ -1.91
USP44-208ENST00000552440 LMTK2Q8IWU2 1503 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 OVOS2A0A0J9YW53 1432 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 OVOS2Q6IE36 1432 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 MYOM1P52179 1685 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 ABCC12Q96J65 1359 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 MYH2Q9UKX2 1941 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 hCG_1818297A0A087WSY0 165 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 MEIKINA0A087WXM9 373 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 OR4C45A6NMZ5 311 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 A8MT66 165 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 K7ERU9 68 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 DNASE2O00115 360 aaPredicted RBP3.11□□□□□ -1.91
USP44-208ENST00000552440 SLC37A4O43826 429 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 COX7A2P2O60397 106 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 ZNF682O95780 498 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 BGLAPP02818 100 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 S100A8P05109 93 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 CTSEP14091 401 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 ZNF30P17039 623 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 RPS3P23396 243 aaKnown RBP eCLIP3.11□□□□□ -1.91
USP44-208ENST00000552440 PSMB3P49720 205 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 LINC01547P58512 204 aaPredicted RBP3.11□□□□□ -1.91
USP44-208ENST00000552440 GNG2P59768 71 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 HERVK_113P61574 105 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 CRADDP78560 199 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 HTR4Q13639 388 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 RHEBQ15382 184 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 ZNF239Q16600 458 aaKnown RBP3.11□□□□□ -1.91
USP44-208ENST00000552440 ZNF773Q6PK81 442 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 TCF23Q7RTU1 214 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 SGPP2Q8IWX5 399 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 EXOC3-AS1Q8N2X6 119 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 OR5A1Q8NGJ0 315 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 OR2T27Q8NH04 317 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 CHCHD5Q9BSY4 110 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 ZNF436Q9C0F3 470 aaPredicted RBP3.11□□□□□ -1.91
USP44-208ENST00000552440 PARP12Q9H0J9 701 aaKnown RBP3.11□□□□□ -1.91
USP44-208ENST00000552440 DHRS4-AS1Q9P1J3 65 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 KLK13Q9UKR3 277 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 NEUROG3Q9Y4Z2 214 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 NWD2Q9ULI1 1742 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 EEA1Q15075 1411 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 CASZ1Q86V15 1759 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 NFASCO94856 1347 aa3.11□□□□□ -1.91
USP44-208ENST00000552440 USP32Q8NFA0 1604 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 TMED7-TICAM2A0A0A6YYA0 188 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 RGS5O15539 181 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 SRSF10O75494 262 aaKnown RBP3.1□□□□□ -1.91
USP44-208ENST00000552440 BANF1O75531 89 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 CDS2O95674 445 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 TSPAN19P0C672 248 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 PGAM2P15259 253 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 IL3RAP26951 378 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 CNTFRP26992 372 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 G6PCP35575 357 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 ZNF140P52738 457 aaPredicted RBP3.1□□□□□ -1.91
USP44-208ENST00000552440 WNT4P56705 351 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 HERVK_113P63121 156 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 SSX1Q16384 188 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 ZFP69Q49AA0 526 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 ZNF613Q6PF04 617 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 HAGHLQ6PII5 290 aaPredicted RBP3.1□□□□□ -1.91
USP44-208ENST00000552440 C2orf66Q6UXQ4 117 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 LINC00596Q86U02 117 aa3.1□□□□□ -1.91
USP44-208ENST00000552440 SLC30A7Q8NEW0 376 aa3.1□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms