RNA–Protein interactions for RNA: ENST00000551691.5

LIMA1-208, Transcript of LIM domain and actin binding 1, humanhuman

TSL 3

Gene LIMA1, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMA1-208ENST00000551691 FUT3P21217 361 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 RGS6P49758 472 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 KLF3P57682 345 aaPredicted RBP2.65□□□□□ -1.99
LIMA1-208ENST00000551691 BLCAPP62952 87 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 SLC35A1P78382 337 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 ERCC8Q13216 396 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 KLRD1Q13241 179 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 PMS2P3Q13401 168 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 RGNQ15493 299 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 TMEM183BQ1AE95 376 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 CEACAM16Q2WEN9 425 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 TMEM155Q4W5P6 130 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 FAM45BPQ6NSW5 357 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 ARL9Q6T311 187 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 COMMD6Q7Z4G1 85 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 TMEM183AQ8IXX5 376 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 SELENOHQ8IZQ5 122 aaKnown RBP2.65□□□□□ -1.99
LIMA1-208ENST00000551691 ARRDC1Q8N5I2 433 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 COX18Q8N8Q8 333 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 OR1S1Q8NH92 325 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF420Q8TAQ5 688 aaPredicted RBP2.65□□□□□ -1.99
LIMA1-208ENST00000551691 PIGXQ8TBF5 258 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 TMEM234Q8WY98 164 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 RGP1Q92546 391 aaPredicted RBP2.65□□□□□ -1.99
LIMA1-208ENST00000551691 SEH1LQ96EE3 360 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 Q96MT0 163 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 NABP2Q9BQ15 211 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 TM2D3Q9BRN9 247 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 AGMATQ9BSE5 352 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 CDCA4Q9BXL8 241 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 SLIRPQ9GZT3 109 aaKnown RBP2.65□□□□□ -1.99
LIMA1-208ENST00000551691 HDHD2Q9H0R4 259 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 C1orf198Q9H425 327 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 TMBIM4Q9HC24 238 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 SIRT7Q9NRC8 400 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 UBQLN4Q9NRR5 601 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 SBDSQ9Y3A5 250 aaKnown RBP eCLIP2.65□□□□□ -1.99
LIMA1-208ENST00000551691 OR51B2Q9Y5P1 312 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 DSPPQ9NZW4 1301 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 KIAA2026Q5HYC2 2103 aa2.65□□□□□ -1.99
LIMA1-208ENST00000551691 TRAV8-4A0A0B4J246 113 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 SULT1C2O00338 296 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 BCL2L11O43521 198 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 SYNGR1O43759 233 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 PSMG1O95456 288 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 P01737 135 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 GYPCP04921 128 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 FBP1P09467 338 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 OR5AL1P0C617 328 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 OCMP0CE72 109 aaPredicted RBP2.64□□□□□ -1.99
LIMA1-208ENST00000551691 PET100P0DJ07 73 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 PGA4P0DJD7 388 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 PGA3P0DJD8 388 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 HTR1DP28221 377 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 CD40LGP29965 261 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 GGT2P36268 569 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 PMELP40967 661 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 NMUP48645 174 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 RWDD2BP57060 319 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 OR2B8PP59922 312 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 LYZP61626 148 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 TNFAIP6P98066 277 aaPredicted RBP2.64□□□□□ -1.99
LIMA1-208ENST00000551691 IL5RAQ01344 420 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 MYL5Q02045 173 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 PSG5Q15238 335 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 ORMDL2Q53FV1 153 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 GCSAMLQ5JQS6 135 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF691Q5VV52 312 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 NOXRED1Q6NXP6 359 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 C3orf33Q6P1S2 294 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 PLET1Q6UQ28 207 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 ACP7Q6ZNF0 438 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 AHSA2Q719I0 299 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 SSX7Q7RTT5 188 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 C6orf120Q7Z4R8 191 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 VMO1Q7Z5L0 202 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 HMGN2P46Q86SG4 172 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 CYP4Z1Q86W10 505 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 NKAIN4Q8IVV8 208 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 CEND1Q8N111 149 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF283Q8N7M2 679 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 OR8G5Q8NG78 346 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 OR5W2Q8NH69 310 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 PIFOQ8TCI5 191 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 C10orf82Q8WW14 230 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 C11orf40Q8WZ69 217 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 ZHX1-C8orf76Q96EF9 292 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 OR2M2Q96R28 347 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 ZNF649Q9BS31 505 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 DCUN1D5Q9BTE7 237 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 SHCBP1LQ9BZQ2 653 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 TSGA10Q9BZW7 698 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 TMEM27Q9HBJ8 222 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 NKIRAS1Q9NYS0 192 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 CLEC2DQ9UHP7 191 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 MRM2Q9UI43 246 aaKnown RBP2.64□□□□□ -1.99
LIMA1-208ENST00000551691 AP3M1Q9Y2T2 418 aa2.64□□□□□ -1.99
LIMA1-208ENST00000551691 TMEM72A0PK05 275 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 A6NDX4 124 aa2.63□□□□□ -1.99
LIMA1-208ENST00000551691 INS-IGF2F8WCM5 200 aa2.63□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms