RNA–Protein interactions for RNA: ENST00000551623.1

PTCH1-223, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-223ENST00000551623 ZNF829Q3KNS6 432 aaPredicted RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF876PQ49A33 203 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 COQ5Q5HYK3 327 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 NHLRC3Q5JS37 347 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 FAM122CQ6P4D5 195 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 BTNL8Q6UX41 500 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 UTS2BQ765I0 119 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 ASRGL1Q7L266 308 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 RRM2BQ7LG56 351 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 UBE2DNLQ8IWF7 75 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 LINC00471Q8N535 108 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 UXS1Q8NBZ7 420 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 NECAP1Q8NC96 275 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SLC37A3Q8NCC5 494 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 OR8J3Q8NGG0 315 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 OR10V1Q8NGI7 309 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 OR10A6Q8NH74 314 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 OR1L1Q8NH94 360 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 CNIH3Q8TBE1 160 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 PLPPR1Q8TBJ4 325 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 CACNG8Q8WXS5 425 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 THRSPQ92748 146 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 SPSB1Q96BD6 273 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 C7orf34Q96L11 122 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 BTBD10Q9BSF8 475 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 UPK3BQ9BT76 320 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 FAM103A1Q9BTL3 118 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 MRPL20Q9BYC9 149 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 PARP12Q9H0J9 701 aaKnown RBP1.55□□□□□ -2.16
PTCH1-223ENST00000551623 MAGT1Q9H0U3 335 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 FBXL15Q9H469 300 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 RAB9BQ9NP90 201 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 CMC2Q9NRP2 79 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF355PQ9NSJ1 428 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF221Q9UK13 617 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 BAIAP2Q9UQB8 552 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 KCNK7Q9Y2U2 307 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 N6AMT1Q9Y5N5 214 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 ETV7Q9Y603 341 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 ENPP4Q9Y6X5 453 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 FAT1Q14517 4588 aa1.55□□□□□ -2.16
PTCH1-223ENST00000551623 TRAV2A0A0B4J234 112 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 TRBV4-1A0A0J9YWV2 114 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 A0A0U1RQV1 116 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 A0A1B0GW64 132 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 TMEM189A5PLL7 270 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 A8MU10 97 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF705FA8MVS1 300 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 PRR32B1ATL7 298 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 H0YJW9 148 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 H0YJX3 145 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 K7EMT4 169 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 SDCBPO00560 298 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ITGB1BP1O14713 200 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 YPEL1O60688 119 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 MRPS14O60783 128 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 SC5DO75845 299 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 DFFBO76075 338 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 NDUFB4O95168 129 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 OR2C1O95371 312 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 CA1P00915 261 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 CA2P00918 260 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 SEMG1P04279 462 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 GYPBP06028 91 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 OR9G9P0C7N8 305 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF705DP0CH99 300 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF705BP0CI00 300 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 SPP1P10451 314 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 DBTP11182 482 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF44P15621 663 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 H2AFXP16104 143 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 RPL35AP18077 110 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 SLC2A5P22732 501 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 NPY1RP25929 384 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 LGALS7P47929 136 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 STX1BP61266 288 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 RHOGP84095 191 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 HTD2P86397 168 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 STX3Q13277 289 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 FXYD3Q14802 87 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 PTGES3Q15185 160 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 PSG5Q15238 335 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 PRSS8Q16651 343 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 FAM106AQ4KMX7 169 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 SLC22A6Q4U2R8 563 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 MORN2Q502X0 79 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 IFI44LQ53G44 452 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 TNFAIP8L3Q5GJ75 292 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 METTL21CQ5VZV1 264 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 LPCAT4Q643R3 524 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 TRAT1Q6PIZ9 186 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 EPGNQ6UW88 154 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 RBPMS2Q6ZRY4 209 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 RASSF6Q6ZTQ3 369 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF767PQ75MW2 155 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 VTCN1Q7Z7D3 282 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 TRPT1Q86TN4 253 aaKnown RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 TBC1D26Q86UD7 250 aa1.54□□□□□ -2.16
PTCH1-223ENST00000551623 HIST2H2ABQ8IUE6 130 aaPredicted RBP1.54□□□□□ -2.16
PTCH1-223ENST00000551623 ZNF679Q8IYX0 411 aa1.54□□□□□ -2.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms