RNA–Protein interactions for RNA: ENST00000551352.1

SMARCD1-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-210ENST00000551352 LRRC10Q5BKY1 277 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 AVPI1Q5T686 147 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 THOC7Q6I9Y2 204 aaKnown RBP6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 ZNF66Q6ZN08 573 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 SLC51BQ86UW2 128 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 FOXRED2Q8IWF2 684 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 FAM71E2Q8N5Q1 922 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 TCTEX1D1Q8N7M0 179 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 LSM10Q969L4 123 aaKnown RBP6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 TMEM186Q96B77 213 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 HSD17B10Q99714 261 aaKnown RBP6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 IFI27L2Q9H2X8 130 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 C19orf12Q9NSK7 152 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 FAM212BQ9NTI7 297 aaPredicted RBP6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 HIF1ANQ9NWT6 349 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 TAS2R3Q9NYW6 316 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 IDI2-AS1Q9NZ38 188 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 CTSZQ9UBR2 303 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 UBQLN2Q9UHD9 624 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 LSM5Q9Y4Y9 91 aaKnown RBP6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 POMT1Q9Y6A1 747 aa6.04□□□□□ -1.44
SMARCD1-210ENST00000551352 LOC105371242A0A075B767 164 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 A0A0G2JRQ6 117 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 A0A1B0GU03 582 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 TMEM89A2RUT3 159 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 B4DSR2 109 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 E5RGE8 158 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 DVL1O14640 695 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 SLC31A2O15432 143 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 IGKV1-5P01602 117 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 IGHV2-70P01814 119 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 MSMBP08118 114 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 HKR1P10072 659 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 SRP14P37108 136 aaKnown RBP6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 LPAR6P43657 344 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 NKX2-1P43699 371 aaPredicted RBP6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 COMPP49747 757 aaPredicted RBP6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 RAB7AP51149 207 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 RPL31P62899 125 aaKnown RBP6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 MRPS11P82912 194 aaKnown RBP6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 ZNF273Q14593 569 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 UTF1Q5T230 341 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 PRAMEF5Q5TYX0 476 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 BTNL3Q6UXE8 466 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 SLC7A5P1Q8MH63 180 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 ZNF439Q8NDP4 499 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 OR10A7Q8NGE5 316 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 RNASE11Q8TAA1 199 aaKnown RBP6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 TCTEX1D2Q8WW35 142 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 ST8SIA2Q92186 375 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 GPR146Q96CH1 333 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 ZNF714Q96N38 554 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 ARPC5LQ9BPX5 153 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 ABHD14AQ9BUJ0 271 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 GAL3ST2Q9H3Q3 398 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 C11orf1Q9H5F2 150 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 RPUSD1Q9UJJ7 312 aaKnown RBP6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 GAB2Q9UQC2 676 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 RCL1Q9Y2P8 373 aaKnown RBP6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 NSG2Q9Y328 171 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 DNAH3Q8TD57 4116 aa6.03□□□□□ -1.44
SMARCD1-210ENST00000551352 TRBV23-1A0A0A0MS06 115 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 RPS10-NUDT3A0A1W2PQS6 291 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 LINC00473A8K010 186 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 C17orf98A8MV24 154 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 F5H0A9 414 aaPredicted RBP6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 M0R1X1 148 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 PPIHO43447 177 aaKnown RBP6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 RAMP3O60896 148 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 PROP1O75360 226 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 PITX3O75364 302 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 MMP23AO75900 390 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 SPDEFO95238 335 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 IGHV2-5P01817 119 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 EPHA1P21709 976 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 NFYBP25208 207 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 RPL12P30050 165 aaKnown RBP6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 DUTP33316 252 aaKnown RBP6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 P2RY1P47900 373 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 ZNF134P52741 427 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 AKR1C2P52895 323 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 BRWD1-AS2P59051 145 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 HILS1P60008 231 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 ID3Q02535 119 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 CT45A1Q5HYN5 189 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 OR2B11Q5JQS5 317 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 CXorf66Q5JRM2 361 aaPredicted RBP6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 TMEM200BQ69YZ2 307 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 HEPN1Q6WQI6 88 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 SPAG16Q8N0X2 631 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 OR8H3Q8N146 312 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 ZNF436-AS1Q8NC38 126 aaPredicted RBP6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 DMBX1Q8NFW5 382 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 CT45A3Q8NHU0 189 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 SCARB1Q8WTV0 552 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 H1FXQ92522 213 aaKnown RBP6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 TAF15Q92804 592 aaKnown RBP eCLIP6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 LEAP2Q969E1 77 aa6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 ZNF471Q9BX82 626 aaPredicted RBP6.02□□□□□ -1.45
SMARCD1-210ENST00000551352 PLEKHA2Q9HB19 425 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms