RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 MGAQ8IWI9 3026 aa9.45□□□□□ -0.9
RAB5C-208ENST00000551338 MED19A0JLT2 244 aaPredicted RBP9.44□□□□□ -0.9
RAB5C-208ENST00000551338 DVL1O14640 695 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 AGPAT2O15120 278 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 IFNA5P01569 189 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 PRH1P02810 166 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 PPOXP50336 477 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 ARHGDIBP52566 201 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 DLX6P56179 175 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 OR2B8PP59922 312 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 ERVFRD-1P60508 538 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 RELBQ01201 579 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 SLC38A11Q08AI6 406 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 TMEM200BQ69YZ2 307 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 HEPN1Q6WQI6 88 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 SSX9Q7RTT3 188 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 MUC15Q8N387 334 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 OR4S2Q8NH73 311 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 DTD1Q8TEA8 209 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 H1FXQ92522 213 aaKnown RBP9.44□□□□□ -0.9
RAB5C-208ENST00000551338 ADTRPQ96IZ2 230 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 PARD6GQ9BYG4 376 aaPredicted RBP9.44□□□□□ -0.9
RAB5C-208ENST00000551338 ZNRD1Q9P1U0 126 aa9.44□□□□□ -0.9
RAB5C-208ENST00000551338 CARHSP1Q9Y2V2 147 aaKnown RBP9.44□□□□□ -0.9
RAB5C-208ENST00000551338 TRAV3A0A0B4J244 114 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 CEBPZOSA8MTT3 80 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 UMAD1C9J7I0 102 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 FAM157AC9JC47 383 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 LYNX1G3V0Z9 82 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 RNASEK-C17orf49H0YIS7 233 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 TSPAN15O95858 294 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 CD5P06127 495 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 OR8U8P0C7N1 319 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 LYNX1P0DP58 116 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 NQO2P16083 231 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 SNCAP37840 140 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 ERVK-16P61578 105 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 HBG1P69891 147 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 HBG2P69892 147 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 POU2AF1Q16633 256 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 LRRC75BQ2VPJ9 315 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 LRRC10Q5BKY1 277 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 SPINK9Q5DT21 86 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 SP5Q6BEB4 398 aaPredicted RBP9.43□□□□□ -0.9
RAB5C-208ENST00000551338 SPSB3Q6PJ21 355 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 LILRB2Q8N423 598 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 COMMD1Q8N668 190 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 CIB3Q96Q77 187 aaPredicted RBP9.43□□□□□ -0.9
RAB5C-208ENST00000551338 RSG1Q9BU20 258 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 TMEM140Q9NV12 185 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 UQCC1Q9NVA1 299 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 PKDREJQ9NTG1 2253 aa9.43□□□□□ -0.9
RAB5C-208ENST00000551338 SPENQ96T58 3664 aaKnown RBP9.43□□□□□ -0.9
RAB5C-208ENST00000551338 C15orf62A8K5M9 175 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 C9JQL5 133 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 NDUFA2O43678 99 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 IGHV2-70P01814 119 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 ARG1P05089 322 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 CT45A6P0DMU7 189 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 CT45A5P0DMU8 189 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 CT45A7P0DMV0 189 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 COL8A2P25067 703 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 GUCA2BQ16661 112 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 HFEQ30201 348 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 TMEM155Q4W5P6 130 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 OR8G2PQ6IF36 304 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 ZNF833PQ6ZTB9 187 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 THNSL2Q86YJ6 484 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 VKORC1L1Q8N0U8 176 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 OR52E5Q8NH55 327 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 ZNF596Q8TC21 504 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 SUN5Q8TC36 379 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 PSMG3Q9BT73 122 aaPredicted RBP9.42□□□□□ -0.9
RAB5C-208ENST00000551338 TMEM147Q9BVK8 224 aa9.42□□□□□ -0.9
RAB5C-208ENST00000551338 WDR61Q9GZS3 305 aaKnown RBP9.42□□□□□ -0.9
RAB5C-208ENST00000551338 UBE2L5PA0A1B0GUS4 154 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 C15orf61A6NNL5 157 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 F8W036 122 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 RBMXL2O75526 392 aaKnown RBP9.41□□□□□ -0.9
RAB5C-208ENST00000551338 FSTL3O95633 263 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 M6PRP20645 277 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 VDAC2P45880 294 aaPredicted RBP9.41□□□□□ -0.9
RAB5C-208ENST00000551338 DVL1P1P54792 670 aaPredicted RBP9.41□□□□□ -0.9
RAB5C-208ENST00000551338 SPCS3P61009 180 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 RPS16P62249 146 aaKnown RBP9.41□□□□□ -0.9
RAB5C-208ENST00000551338 DEFA5Q01523 94 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 GUK1Q16774 197 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 ATP6V1FQ16864 119 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 PDLIM3Q53GG5 364 aaPredicted RBP9.41□□□□□ -0.9
RAB5C-208ENST00000551338 AKR1C8PQ5T2L2 129 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 OR4A47Q6IF82 309 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 C11orf71Q6IPW1 123 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 SLC25A24Q6NUK1 477 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 DPPA3Q6W0C5 159 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 LINC00311Q8N616 119 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 LFNGQ8NES3 379 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 SCGB1C1Q8TD33 95 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 RBMXL1Q96E39 390 aaKnown RBP9.41□□□□□ -0.9
RAB5C-208ENST00000551338 SEC11CQ9BY50 192 aa9.41□□□□□ -0.9
RAB5C-208ENST00000551338 SLC35D1Q9NTN3 355 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms