RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 ZNF580Q9UK33 172 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 STUB1Q9UNE7 303 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 EXOSC1Q9Y3B2 195 aaKnown RBP5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 AK6Q9Y3D8 172 aaKnown RBP5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 PCLOQ9Y6V0 5065 aa5.17□□□□□ -1.58
PRPF40B-214ENST00000551320 HERC2O95714 4834 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 HECTD4Q9Y4D8 3996 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 IGKV1D-8A0A087WSZ0 117 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 SMIM30A4D0T7 59 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 HMX3A6NHT5 357 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 MSGN1A6NI15 193 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 ZNF785A8K8V0 405 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 FAM90A23PA8MXZ1 464 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 ANKRD65E5RJM6 399 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 PTGES3LE9PB15 166 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 BMPR1BO00238 502 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 ATP5HO75947 161 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 GSTT2P0CG29 244 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 GSTT2BP0CG30 244 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 CRIP2P52943 208 aaPredicted RBP5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 CD81P60033 236 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 RPS25P62851 125 aaKnown RBP5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 HLA-DRB3P79483 266 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 ZNF45Q02386 682 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 TMEM267Q0VDI3 215 aaPredicted RBP5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 GUCA2BQ16661 112 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 MOGAT2Q3SYC2 334 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 AKIRIN2Q53H80 203 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 PLAC9Q5JTB6 97 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 ZFP1Q6P2D0 407 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 TRAT1Q6PIZ9 186 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 ZNF562Q6V9R5 426 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 CEACAM19Q7Z692 300 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 VKORC1L1Q8N0U8 176 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 ELOVL1Q9BW60 279 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 PECRQ9BY49 303 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 LPAR5Q9H1C0 372 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 OR2D2Q9H210 308 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 Q9N2K0 584 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 SLC35D1Q9NTN3 355 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 CHCHD3Q9NX63 227 aaKnown RBP5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 ERGIC3Q9Y282 383 aa5.16□□□□□ -1.58
PRPF40B-214ENST00000551320 IGHV3-35A0A0C4DH35 117 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 OR5H14A6NHG9 310 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 FAM90A7PA6NKC0 464 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 LINC00473A8K010 186 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 TMEM14DPA8MWL7 114 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 E7EUB6 86 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 MYL12BO14950 172 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 OR2C1O95371 312 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 TFAP2AP05549 437 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 CRYGBP07316 175 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 WNT4P56705 351 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 TNXAQ16473 311 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 C1orf100Q5SVJ3 147 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 HES5Q5TA89 166 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 LIPKQ5VXJ0 399 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 TMEM91Q6ZNR0 172 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 RPP25LQ8N5L8 163 aaKnown RBP5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 NANOGP1Q8N7R0 232 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 HARBI1Q96MB7 349 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 PHB2Q99623 299 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 NEURL2Q9BR09 285 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 SRD5A3Q9H8P0 318 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 RANGRFQ9HD47 186 aaPredicted RBP5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 AKIP1Q9NQ31 210 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 SDHAF2Q9NX18 166 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 PIPOXQ9P0Z9 390 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 PEF1Q9UBV8 284 aaKnown RBP5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 PSORS1C1Q9UIG5 152 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 ZNF221Q9UK13 617 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 KCNK7Q9Y2U2 307 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 CEPT1Q9Y6K0 416 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 RYR1P21817 5038 aa5.15□□□□□ -1.59
PRPF40B-214ENST00000551320 IGHV3OR16-8A0A075B7F1 116 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 A0A1B0GW64 132 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 EFCAB10A6NFE3 127 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 FOXI3A8MTJ6 420 aaPredicted RBP5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 SLC22A1O15245 554 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 CA11O75493 328 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 DEDDO75618 318 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 OR2J3O76001 311 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 SCAF4O95104 1147 aaKnown RBP5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 CRYZL1O95825 349 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 LY6G6CO95867 125 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 REG1AP05451 166 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 GLAP06280 429 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 FCER2P06734 321 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 HSMCR30P0CW71 290 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 GNB3P16520 340 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 SRMP19623 302 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 ZBTB25P24278 435 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 MC5RP33032 325 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 MAP2K4P45985 399 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 OR10A3P58181 314 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 RHOGP84095 191 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 TNFRSF9Q07011 255 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 EXOSC2Q13868 293 aaKnown RBP5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 RPEL1Q2QD12 228 aa5.14□□□□□ -1.59
PRPF40B-214ENST00000551320 TMEM30BQ3MIR4 351 aa5.14□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms