RNA–Protein interactions for RNA: ENST00000551165.5

SSH1-209, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SSH1, Length 2,354 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-209ENST00000551165 TRBV23-1A0A0A0MS06 115 aa16.07■□□□□ 0.16
SSH1-209ENST00000551165 J3QR06 171 aa16.07■□□□□ 0.16
SSH1-209ENST00000551165 TNFRSF9Q07011 255 aa16.07■□□□□ 0.16
SSH1-209ENST00000551165 SRSF1Q07955 248 aaKnown RBP eCLIP16.07■□□□□ 0.16
SSH1-209ENST00000551165 COMMD7Q86VX2 200 aa16.07■□□□□ 0.16
SSH1-209ENST00000551165 TIMD4Q96H15 378 aa16.07■□□□□ 0.16
SSH1-209ENST00000551165 UBR5O95071 2799 aaPredicted RBP16.07■□□□□ 0.16
SSH1-209ENST00000551165 FBXO24O75426 580 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 F12P00748 615 aaPredicted RBP16.06■□□□□ 0.16
SSH1-209ENST00000551165 IGKV1-16P04430 117 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 UBE2KP61086 200 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 TAGLNQ01995 201 aaKnown RBP16.06■□□□□ 0.16
SSH1-209ENST00000551165 ZDHHC16Q969W1 377 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 QTRT1Q9BXR0 403 aaKnown RBP16.06■□□□□ 0.16
SSH1-209ENST00000551165 MRPL20Q9BYC9 149 aaKnown RBP16.06■□□□□ 0.16
SSH1-209ENST00000551165 CTNNBIP1Q9NSA3 81 aaPredicted RBP16.06■□□□□ 0.16
SSH1-209ENST00000551165 HSPB7Q9UBY9 170 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 MIOXQ9UGB7 285 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 RFNGQ9Y644 331 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 AUP1Q9Y679 476 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 PPIAL4CA0A0B4J2A2 164 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 RBFOX2O43251 390 aaKnown RBP eCLIP16.06■□□□□ 0.16
SSH1-209ENST00000551165 PPIAL4GP0DN37 164 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 MMP9P14780 707 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 THBS3P49746 956 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 ZNF833PQ6ZTB9 187 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 ABHD12Q8N2K0 398 aa16.06■□□□□ 0.16
SSH1-209ENST00000551165 SVEP1Q4LDE5 3571 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 DYNLT3P51808 116 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 OR5C1Q8NGR4 320 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 RAB40CQ96S21 281 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 TXNL1O43396 289 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 RBMXL2O75526 392 aaKnown RBP16.05■□□□□ 0.16
SSH1-209ENST00000551165 ATG12O94817 140 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 GAPDHP04406 335 aaKnown RBP16.05■□□□□ 0.16
SSH1-209ENST00000551165 PDZD9Q8IXQ8 264 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 SLC25A32Q9H2D1 315 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 TMEM133Q9H2Q1 129 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 PSENENQ9NZ42 101 aa16.05■□□□□ 0.16
SSH1-209ENST00000551165 ANKRD34BA5PLL1 514 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 JTBO76095 146 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 FAM157CP0CG43 387 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 RRASP10301 218 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 ARL16Q0P5N6 197 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 OR10X1Q8NGY0 326 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 OR4S2Q8NH73 311 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 PATZ1Q9HBE1 687 aaKnown RBP16.04■□□□□ 0.16
SSH1-209ENST00000551165 A0A087X0M5 115 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 A0A1B0GX30 115 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 ZNF525Q8N782 197 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 UBAC2Q8NBM4 344 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 SLC25A31Q9H0C2 315 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 SH3BGRL3Q9H299 93 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 BARX1Q9HBU1 254 aaPredicted RBP16.04■□□□□ 0.16
SSH1-209ENST00000551165 TMEM140Q9NV12 185 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 WSB1Q9Y6I7 421 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 SESN1Q9Y6P5 492 aa16.04■□□□□ 0.16
SSH1-209ENST00000551165 MED13LQ71F56 2210 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 SRRM4A7MD48 611 aaKnown RBP16.03■□□□□ 0.16
SSH1-209ENST00000551165 METTL15P1P0C7V9 234 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 NQO2P16083 231 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 S100A1P23297 94 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 GPR6P46095 362 aaPredicted RBP16.03■□□□□ 0.16
SSH1-209ENST00000551165 EFNA4P52798 201 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 RPL23AP62750 156 aaKnown RBP16.03■□□□□ 0.16
SSH1-209ENST00000551165 GNB2P62879 340 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 SPANXN5Q5MJ07 72 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 HAPLN4Q86UW8 402 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 ZNF596Q8TC21 504 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 ST6GALNAC6Q969X2 333 aa16.03■□□□□ 0.16
SSH1-209ENST00000551165 TET2Q6N021 2002 aaPredicted RBP16.03■□□□□ 0.16
SSH1-209ENST00000551165 OVOL3O00110 214 aa16.02■□□□□ 0.16
SSH1-209ENST00000551165 KIR2DS2P43631 304 aa16.02■□□□□ 0.16
SSH1-209ENST00000551165 RPS16P62249 146 aaKnown RBP16.02■□□□□ 0.16
SSH1-209ENST00000551165 HSD17B11Q8NBQ5 300 aa16.02■□□□□ 0.16
SSH1-209ENST00000551165 OR9G1Q8NH87 305 aa16.02■□□□□ 0.16
SSH1-209ENST00000551165 ARV1Q9H2C2 271 aa16.02■□□□□ 0.16
SSH1-209ENST00000551165 LY6G5BQ8NDX9 201 aa16.02■□□□□ 0.15
SSH1-209ENST00000551165 C8orf46Q8TAG6 207 aa16.02■□□□□ 0.15
SSH1-209ENST00000551165 ADTRPQ96IZ2 230 aa16.02■□□□□ 0.15
SSH1-209ENST00000551165 SMIM8Q96KF7 97 aa16.02■□□□□ 0.15
SSH1-209ENST00000551165 RHOVQ96L33 236 aa16.02■□□□□ 0.15
SSH1-209ENST00000551165 REG4Q9BYZ8 158 aa16.02■□□□□ 0.15
SSH1-209ENST00000551165 SLC35D1Q9NTN3 355 aa16.02■□□□□ 0.15
SSH1-209ENST00000551165 ONECUT1Q9UBC0 465 aa16.02■□□□□ 0.15
SSH1-209ENST00000551165 FAM90A26D6RGX4 464 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 GPR37O15354 613 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 MYOD1P15172 320 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 RELBQ01201 579 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 LINC00311Q8N616 119 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 LRRK2Q5S007 2527 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 IGHV2-26A0A0B4J1V2 119 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 COX7A1P24310 79 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 OR4A47Q6IF82 309 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 Q8N7P7 452 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 RAB39BQ96DA2 213 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 OR4C12Q96R67 309 aa16.01■□□□□ 0.15
SSH1-209ENST00000551165 SSBP3Q9BWW4 388 aaPredicted RBP16.01■□□□□ 0.15
SSH1-209ENST00000551165 FGF16O43320 207 aa16■□□□□ 0.15
SSH1-209ENST00000551165 ERVK-16P61578 105 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 272.4 ms