RNA–Protein interactions for RNA: ENST00000551008.5

NPAS3-209, Transcript of neuronal PAS domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene NPAS3, Length 1,002 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-209ENST00000551008 PRR25Q96S07 402 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 LSM4Q9Y4Z0 139 aaKnown RBP10.05□□□□□ -0.8
NPAS3-209ENST00000551008 STAB2Q8WWQ8 2551 aa10.05□□□□□ -0.8
NPAS3-209ENST00000551008 LOC100506127A0A0U1RQW1 187 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 TUSC2O75896 110 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 IGHV3-11P01762 117 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 OR8U8P0C7N1 319 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 NFYAP23511 347 aaPredicted RBP10.04□□□□□ -0.8
NPAS3-209ENST00000551008 TALDO1P37837 337 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 BRWD1-AS2P59051 145 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 DEFA5Q01523 94 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 FXYD3Q14802 87 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 ACTBL2Q562R1 376 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 GRPEL2Q8TAA5 225 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 ABHD5Q8WTS1 349 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 RHOVQ96L33 236 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 HARBI1Q96MB7 349 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 MS4A10Q96PG2 267 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 GINS4Q9BRT9 223 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 ST6GALNAC5Q9BVH7 336 aa10.04□□□□□ -0.8
NPAS3-209ENST00000551008 J3QRK9 145 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 HLA-DQB1P01920 261 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 PTHLHP12272 177 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 LGALS7P47929 136 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 DEFB121Q5J5C9 76 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 GVQW1Q8N7I0 195 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 YIPF6Q96EC8 236 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 B9D2Q9BPU9 175 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 DCSTAMPQ9H295 470 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 OR2W1Q9Y3N9 320 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 TENM3Q9P273 2699 aa10.03□□□□□ -0.8
NPAS3-209ENST00000551008 CRYZL1O95825 349 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 SCAND1P57086 179 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 TPPP2P59282 170 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 TMEM267Q0VDI3 215 aaPredicted RBP10.02□□□□□ -0.81
NPAS3-209ENST00000551008 ARL6IP1Q15041 203 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 IDNKQ5T6J7 187 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 IDO2Q6ZQW0 420 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 ZNF645Q8N7E2 425 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 POC5Q8NA72 575 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 GPHA2Q96T91 129 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 ANXA10Q9UJ72 324 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 RBMX2Q9Y388 322 aaKnown RBP10.02□□□□□ -0.81
NPAS3-209ENST00000551008 ETV7Q9Y603 341 aa10.02□□□□□ -0.81
NPAS3-209ENST00000551008 TRAV18A0A075B6X5 111 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 TRIM64CA6NLI5 447 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 LINC01619G3V211 115 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 OVOL1O14753 267 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 SHOXO15266 292 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 RAMP3O60896 148 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 TRGV3P03979 118 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 SAA1P0DJI8 122 aaPredicted RBP10.01□□□□□ -0.81
NPAS3-209ENST00000551008 ECI1P42126 302 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 GNG2P59768 71 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 UBE2KP61086 200 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 PITPNAQ00169 270 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 PRSS8Q16651 343 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 RTL8BQ17RB0 113 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 C10orf55Q5SWW7 151 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 PYHIN1Q6K0P9 492 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 CNIH2Q6PI25 160 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 OVCH2Q7RTZ1 564 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 OR5T1Q8NG75 326 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 SNAPC3Q92966 411 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 ADTRPQ96IZ2 230 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 AUNIPQ9H7T9 357 aa10.01□□□□□ -0.81
NPAS3-209ENST00000551008 A0A1B0GW64 132 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 SCGNO76038 276 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 BRI3O95415 125 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 TRBV12-3P01733 135 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 APELAP0DMC3 54 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 TAGLNQ01995 201 aaKnown RBP10□□□□□ -0.81
NPAS3-209ENST00000551008 DYRK1AQ13627 763 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 OR2B11Q5JQS5 317 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 ACSM6Q6P461 480 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 TEX45Q8NA69 505 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 ADAD2Q8NCV1 583 aaKnown RBP10□□□□□ -0.81
NPAS3-209ENST00000551008 SLA2Q9H6Q3 261 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 ZNF430Q9H8G1 570 aaPredicted RBP10□□□□□ -0.81
NPAS3-209ENST00000551008 SPATA2Q9UM82 520 aa10□□□□□ -0.81
NPAS3-209ENST00000551008 RBM7Q9Y580 266 aaKnown RBP10□□□□□ -0.81
NPAS3-209ENST00000551008 KMT2CQ8NEZ4 4911 aaKnown RBP9.99□□□□□ -0.81
NPAS3-209ENST00000551008 H3BUA1 57 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 FCGR3BO75015 233 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 HSPB1P04792 205 aaKnown RBP9.99□□□□□ -0.81
NPAS3-209ENST00000551008 FCER2P06734 321 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 CTXN2P0C2S0 81 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 RRASP10301 218 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 AADACP22760 399 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 RPS19P39019 145 aaKnown RBP9.99□□□□□ -0.81
NPAS3-209ENST00000551008 ZNF45Q02386 682 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 KCTD9Q7L273 389 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 HAPLN4Q86UW8 402 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 HOGA1Q86XE5 327 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 VKORC1L1Q8N0U8 176 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 BEST4Q8NFU0 473 aa9.99□□□□□ -0.81
NPAS3-209ENST00000551008 OSR1Q8TAX0 266 aaPredicted RBP9.99□□□□□ -0.81
NPAS3-209ENST00000551008 SRSF12Q8WXF0 261 aaKnown RBP9.99□□□□□ -0.81
NPAS3-209ENST00000551008 TINAGL1Q9GZM7 467 aaPredicted RBP9.99□□□□□ -0.81
NPAS3-209ENST00000551008 ADAM30Q9UKF2 790 aa9.99□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms