RNA–Protein interactions for RNA: ENST00000550841.1

NEK3-202, Transcript of NIMA related kinase 3, humanhuman

TSL 4

Gene NEK3, Length 569 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-202ENST00000550841 TNFSF12O43508 249 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 PGLYRP1O75594 196 aaPredicted RBP17.1■□□□□ 0.33
NEK3-202ENST00000550841 TSPAN9O75954 239 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 RPL30P62888 115 aaKnown RBP17.1■□□□□ 0.33
NEK3-202ENST00000550841 FOXL1Q12952 345 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 MMDQ15546 238 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 ABCA11PQ4W5N1 156 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 IDO2Q6ZQW0 420 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 NPBQ8NG41 125 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 CD300LFQ8TDQ1 290 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 RASL11BQ9BPW5 248 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 PLSCR3Q9NRY6 295 aa17.1■□□□□ 0.33
NEK3-202ENST00000550841 A0A1B0GUS0 222 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 NBR2O15453 112 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 FCGR3BO75015 233 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 RAG2P55895 527 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 FBLN7Q53RD9 439 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 TMEM177Q53S58 311 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 C11orf88Q6PI97 169 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 TCTEX1D1Q8N7M0 179 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 OR4S2Q8NH73 311 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 OSR1Q8TAX0 266 aaPredicted RBP17.09■□□□□ 0.33
NEK3-202ENST00000550841 AIFM2Q9BRQ8 373 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 C16orf95Q9H693 158 aa17.09■□□□□ 0.33
NEK3-202ENST00000550841 C14orf166Q9Y224 244 aaKnown RBP17.09■□□□□ 0.33
NEK3-202ENST00000550841 TMEM89A2RUT3 159 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 HAX1O00165 279 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 SHOXO15266 292 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 IGKV1-16P04430 117 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 F2RL1P55085 397 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 RND3P61587 244 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 PHLDA2Q53GA4 152 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 Q6ZSV7 163 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 C5orf56Q8N8D9 126 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 CCDC71LQ8N9Z2 235 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 MARCH1Q8TCQ1 289 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 BEX1Q9HBH7 125 aa17.08■□□□□ 0.32
NEK3-202ENST00000550841 LIN7CQ9NUP9 197 aaKnown RBP17.08■□□□□ 0.32
NEK3-202ENST00000550841 RBFOX2O43251 390 aaKnown RBP eCLIP17.07■□□□□ 0.32
NEK3-202ENST00000550841 SPDEFO95238 335 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 CRYZL1O95825 349 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 CTSDP07339 412 aaPredicted RBP17.07■□□□□ 0.32
NEK3-202ENST00000550841 BLCAPP62952 87 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 SPAG16Q8N0X2 631 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 Q8N9W7 124 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 OR13C8Q8NGS7 320 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 OR51H1Q8NH63 302 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 OR2T6Q8NHC8 308 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 RITA1Q96K30 269 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 SLC25A21Q9BQT8 299 aaPredicted RBP17.07■□□□□ 0.32
NEK3-202ENST00000550841 COPZ2Q9P299 210 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 STAB1Q9NY15 2570 aa17.07■□□□□ 0.32
NEK3-202ENST00000550841 RRHO14718 337 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 NDUFA3O95167 84 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 RLN1P04808 185 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 PIGPP57054 158 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 RELBQ01201 579 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 ARSJQ5FYB0 599 aaPredicted RBP17.06■□□□□ 0.32
NEK3-202ENST00000550841 Q8N2B8 174 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 HARBI1Q96MB7 349 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 GPHA2Q96T91 129 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 SLC2A9Q9NRM0 540 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 FAM212BQ9NTI7 297 aaPredicted RBP17.06■□□□□ 0.32
NEK3-202ENST00000550841 GPR132Q9UNW8 380 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 MMP24Q9Y5R2 645 aa17.06■□□□□ 0.32
NEK3-202ENST00000550841 LINC00854A0A1B0GVQ3 168 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 MPPED1O15442 326 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 AMY1AP04745 511 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 F2RP25116 425 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 PLGLAQ15195 96 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 PSG5Q15238 335 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 C5orf64Q2M2E5 130 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 VMA21Q3ZAQ7 101 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 OR2B11Q5JQS5 317 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 LIN54Q6MZP7 749 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 TBC1D26Q86UD7 250 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 FAM71E2Q8N5Q1 922 aa17.05■□□□□ 0.32
NEK3-202ENST00000550841 CLPSL1A2RUU4 121 aa17.04■□□□□ 0.32
NEK3-202ENST00000550841 PEX14O75381 377 aa17.04■□□□□ 0.32
NEK3-202ENST00000550841 B3GALNT1O75752 331 aa17.04■□□□□ 0.32
NEK3-202ENST00000550841 HPRT1P00492 218 aa17.04■□□□□ 0.32
NEK3-202ENST00000550841 HRASP01112 189 aa17.04■□□□□ 0.32
NEK3-202ENST00000550841 CNTFRP26992 372 aa17.04■□□□□ 0.32
NEK3-202ENST00000550841 C9orf152Q5JTZ5 239 aa17.04■□□□□ 0.32
NEK3-202ENST00000550841 MRGPRFQ96AM1 343 aa17.04■□□□□ 0.32
NEK3-202ENST00000550841 ZNF702PQ9H963 129 aa17.04■□□□□ 0.32
NEK3-202ENST00000550841 PI3P19957 117 aa17.03■□□□□ 0.32
NEK3-202ENST00000550841 TEX45Q8NA69 505 aa17.03■□□□□ 0.32
NEK3-202ENST00000550841 LINC01006Q8NI28 216 aa17.03■□□□□ 0.32
NEK3-202ENST00000550841 RBMXL1Q96E39 390 aaKnown RBP17.03■□□□□ 0.32
NEK3-202ENST00000550841 RTBDNQ9BSG5 229 aaPredicted RBP17.03■□□□□ 0.32
NEK3-202ENST00000550841 PLEKHA2Q9HB19 425 aa17.03■□□□□ 0.32
NEK3-202ENST00000550841 METTL1Q9UBP6 276 aaKnown RBP17.03■□□□□ 0.32
NEK3-202ENST00000550841 KCNAB3O43448 404 aa17.02■□□□□ 0.32
NEK3-202ENST00000550841 UPK1BO75841 260 aa17.02■□□□□ 0.32
NEK3-202ENST00000550841 BRWD1-AS2P59051 145 aa17.02■□□□□ 0.32
NEK3-202ENST00000550841 UBE2KP61086 200 aa17.02■□□□□ 0.32
NEK3-202ENST00000550841 RBMS2Q15434 407 aaKnown RBP17.02■□□□□ 0.32
NEK3-202ENST00000550841 VSTM2AQ8TAG5 236 aa17.02■□□□□ 0.32
NEK3-202ENST00000550841 FBXL15Q9H469 300 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms