RNA–Protein interactions for RNA: ENST00000550228.5

GPN3-207, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 353 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-207ENST00000550228 MALSU1Q96EH3 234 aa6.56□□□□□ -1.36
GPN3-207ENST00000550228 PHB2Q99623 299 aa6.56□□□□□ -1.36
GPN3-207ENST00000550228 TMEM222Q9H0R3 208 aa6.56□□□□□ -1.36
GPN3-207ENST00000550228 MED28Q9H204 178 aa6.56□□□□□ -1.36
GPN3-207ENST00000550228 GSX1Q9H4S2 264 aaPredicted RBP6.56□□□□□ -1.36
GPN3-207ENST00000550228 WASHC3Q9Y3C0 194 aa6.56□□□□□ -1.36
GPN3-207ENST00000550228 CSMD1Q96PZ7 3565 aa6.56□□□□□ -1.36
GPN3-207ENST00000550228 AKAP9Q99996 3911 aa6.56□□□□□ -1.36
GPN3-207ENST00000550228 FAM25EA8MYX2 175 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 GOSR2O14653 212 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 SHOXO15266 292 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 RBFOX2O43251 390 aaKnown RBP eCLIP6.55□□□□□ -1.36
GPN3-207ENST00000550228 ADAP1O75689 374 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 B3GALNT1O75752 331 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 VENTXO95231 258 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 IGKV1D-33P01593 117 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 IGKV1-33P01594 117 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 IGKV1-39P01597 117 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 IGKV1-16P04430 117 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 IGKV1D-39P04432 117 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 SNRNP70P08621 437 aaKnown RBP6.55□□□□□ -1.36
GPN3-207ENST00000550228 HOXB5P09067 269 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 FBP1P09467 338 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 RRASP10301 218 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 MC5RP33032 325 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 RAB13P51153 203 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 ARHGDIBP52566 201 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 AKR1C2P52895 323 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 SRPXP78539 464 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 HES1Q14469 280 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 HNF4GQ14541 408 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 FCN2Q15485 313 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 DEFB112Q30KQ8 113 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 SSX9Q7RTT3 188 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 LYZL2Q7Z4W2 148 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 PDPNQ86YL7 162 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 SELENOHQ8IZQ5 122 aaKnown RBP6.55□□□□□ -1.36
GPN3-207ENST00000550228 VKORC1L1Q8N0U8 176 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 TEX29Q8N6K0 151 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 TCTEX1D1Q8N7M0 179 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 SLC35G3Q8N808 338 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 OR5AN1Q8NGI8 311 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 CD300LFQ8TDQ1 290 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 MITD1Q8WV92 249 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 CFHR4Q92496 578 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 RBPMSQ93062 196 aaKnown RBP6.55□□□□□ -1.36
GPN3-207ENST00000550228 R3HDM4Q96D70 268 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 HARBI1Q96MB7 349 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 MGAT4CQ9UBM8 478 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 TLN2Q9Y4G6 2542 aa6.55□□□□□ -1.36
GPN3-207ENST00000550228 A0A0B4J2A0 478 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 SIX6O95475 246 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 CDS2O95674 445 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 HPRT1P00492 218 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 KRASP01116 189 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 FOSL1P15407 271 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 TMEM11P17152 192 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 CNTFRP26992 372 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 CD1BP29016 333 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 BRS3P32247 399 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 G6PCP35575 357 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 BPIFB3P59826 476 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 ERVK-16P61578 105 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 RRAS2P62070 204 aaPredicted RBP6.54□□□□□ -1.36
GPN3-207ENST00000550228 TAGLNQ01995 201 aaKnown RBP6.54□□□□□ -1.36
GPN3-207ENST00000550228 LY6EQ16553 131 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 C2orf68Q2NKX9 166 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 LRRC75BQ2VPJ9 315 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 FBLN7Q53RD9 439 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 GGNBP1Q5YKI7 109 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 DHRS7BQ6IAN0 325 aaPredicted RBP6.54□□□□□ -1.36
GPN3-207ENST00000550228 CADM3Q8N126 398 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 DMBX1Q8NFW5 382 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 ZDHHC16Q969W1 377 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 FLYWCH2Q96CP2 140 aaKnown RBP6.54□□□□□ -1.36
GPN3-207ENST00000550228 RITA1Q96K30 269 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 TMEM56Q96MV1 263 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 PLEKHA2Q9HB19 425 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 COMMD9Q9P000 198 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 SHPKQ9UHJ6 478 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 TMEM56-RWDD3S4R434 201 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 VPS13CQ709C8 3753 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 ZANQ9Y493 2812 aa6.54□□□□□ -1.36
GPN3-207ENST00000550228 SONP18583 2426 aaKnown RBP6.53□□□□□ -1.36
GPN3-207ENST00000550228 A0A0G2JRQ6 117 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 C13orf42A0A1B0GVH6 325 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 C5orf51A6NDU8 294 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 MARCH11A6NNE9 402 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 H3BUX3 64 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 ATG12O94817 140 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 MOSP00540 346 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 HRASP01112 189 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 IFNA21P01568 189 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 IGKV1-5P01602 117 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 SAA1P0DJI8 122 aaPredicted RBP6.53□□□□□ -1.36
GPN3-207ENST00000550228 NQO2P16083 231 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 BCAP31P51572 246 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 HABP2Q14520 560 aaPredicted RBP6.53□□□□□ -1.36
GPN3-207ENST00000550228 MMDQ15546 238 aa6.53□□□□□ -1.36
GPN3-207ENST00000550228 IZUMO4Q1ZYL8 232 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms