RNA–Protein interactions for RNA: ENST00000549249.5

DEPDC4-207, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 1,003 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-207ENST00000549249 CHIAQ9BZP6 476 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF436Q9C0F3 470 aaPredicted RBP6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 RAB18Q9NP72 206 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 LIN7CQ9NUP9 197 aaKnown RBP6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 TMEM56-RWDD3S4R434 201 aa6.56□□□□□ -1.36
DEPDC4-207ENST00000549249 VPS13CQ709C8 3753 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A1W2PRD5 423 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A1W2PRF3 423 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A1W2PRM7 423 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 RNF212BA8MTL3 300 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 LY6LH3BQJ8 138 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 SMLR1H3BR10 107 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 BUB1B-PAK6H3BSN5 160 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 B3GALNT1O75752 331 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 TOX4O94842 621 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 OR2A4O95047 310 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 S1PR2O95136 353 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 IGKV1-5P01602 117 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 HOXB5P09067 269 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 GIPP09681 153 aaPredicted RBP6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 CT45A6P0DMU7 189 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 CT45A5P0DMU8 189 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 CT45A7P0DMV0 189 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 IGHV4-31P0DP07 118 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 LPAR6P43657 344 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 REG1BP48304 166 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 SRSF4Q08170 494 aaKnown RBP6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF816Q0VGE8 651 aaPredicted RBP6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 CATR1Q13166 79 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 TMEM268Q5VZI3 342 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 CDPF1Q6NVV7 123 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 FAM71F2Q6NXP2 309 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 C11orf88Q6PI97 169 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 LHFPL4Q7Z7J7 247 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 PDZD9Q8IXQ8 264 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 TCTE3Q8IZS6 198 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 SPAG16Q8N0X2 631 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 WFDC11Q8NEX6 87 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 OR13D1Q8NGV5 346 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 OR10X1Q8NGY0 326 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 RBPMSQ93062 196 aaKnown RBP6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 IL22RA2Q969J5 263 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 OR10C1Q96KK4 312 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 OR2A7Q96R45 310 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 NABP2Q9BQ15 211 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 PCGF1Q9BSM1 259 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 FAM212BQ9NTI7 297 aaPredicted RBP6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 ABCA1O95477 2261 aa6.55□□□□□ -1.36
DEPDC4-207ENST00000549249 ITPR3Q14573 2671 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 A0A1W2PPI3 338 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 B4DSR2 109 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 H0YJW9 148 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 TOR1AO14656 332 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 ARG1P05089 322 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 P0C879 139 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 FOSL1P15407 271 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 THBS3P49746 956 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 PRRX1P54821 245 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 SRPXP78539 464 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 IL15RAQ13261 267 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 IZUMO4Q1ZYL8 232 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 Q5BKY6 102 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 NMSQ5H8A3 153 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 TPTE2P1Q5T6R2 138 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 ZNF695Q8IW36 515 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 FAM219AQ8IW50 185 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 CIARTQ8N365 385 aaPredicted RBP6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 TCTEX1D1Q8N7M0 179 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 C17orf50Q8WW18 174 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 LHX4Q969G2 390 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 TMEM186Q96B77 213 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 AJUBAQ96IF1 538 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 SEC22AQ96IW7 307 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 ADTRPQ96IZ2 230 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 S1PR3Q99500 378 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 HEXA-AS1Q9H8Q6 139 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 TNCP24821 2201 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 NF1P21359 2839 aa6.54□□□□□ -1.36
DEPDC4-207ENST00000549249 NAV3Q8IVL0 2385 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 TRAV14DV4A0A0A6YYC5 116 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 TRAV20A0A0B4J274 112 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 C13orf42A0A1B0GVH6 325 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 DUXBA0A1W2PPF3 345 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 C5orf51A6NDU8 294 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 FAM25EA8MYX2 175 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 RBFOX2O43251 390 aaKnown RBP eCLIP6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 FCGR3BO75015 233 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 IGKV1-16P04430 117 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 SERPINE2P07093 398 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 RPA2P15927 270 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 PAX6P26367 422 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 IL3RAP26951 378 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 HTR1DP28221 377 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 KIR2DS2P43631 304 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 RAP2BP61225 183 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 TMEM249Q2WGJ8 235 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 GSG1LQ6UXU4 331 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 Q6ZRM9 215 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 DYNAPQ8N1N2 210 aa6.53□□□□□ -1.36
DEPDC4-207ENST00000549249 LINC01356Q8N9X3 169 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms