RNA–Protein interactions for RNA: ENST00000548877.1

CDX2-202, Transcript of caudal type homeobox 2, humanhuman

TSL 3

Gene CDX2, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2-202ENST00000548877 MRPS24Q96EL2 167 aaKnown RBP10.4□□□□□ -0.74
CDX2-202ENST00000548877 NEDD4LQ96PU5 975 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 METTL9Q9H1A3 318 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 ING4Q9UNL4 249 aa10.4□□□□□ -0.74
CDX2-202ENST00000548877 IGHV4OR15-8A0A075B7B6 117 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 A0A087WW49 117 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 IGHV7-81A0A0B4J1V7 117 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 TRAV41A0A0B4J266 112 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 INMT-MINDY4F8WBC2 141 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 SDCBPO00560 298 aaPredicted RBP10.39□□□□□ -0.75
CDX2-202ENST00000548877 ATP6V0E1O15342 81 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 CRTAPO75718 401 aaPredicted RBP10.39□□□□□ -0.75
CDX2-202ENST00000548877 LGALS1P09382 135 aaKnown RBP10.39□□□□□ -0.75
CDX2-202ENST00000548877 CBX5P45973 191 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 TAS2R19P59542 299 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 UNC119Q13432 240 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 TMEM30BQ3MIR4 351 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 RNASE12Q5GAN4 147 aaKnown RBP10.39□□□□□ -0.75
CDX2-202ENST00000548877 NHLRC3Q5JS37 347 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 AKAP14Q86UN6 197 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 ARL11Q969Q4 196 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 OR4C12Q96R67 309 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 DPCDQ9BVM2 203 aaPredicted RBP10.39□□□□□ -0.75
CDX2-202ENST00000548877 ALX4Q9H161 411 aaPredicted RBP10.39□□□□□ -0.75
CDX2-202ENST00000548877 IL36GQ9NZH8 169 aa10.39□□□□□ -0.75
CDX2-202ENST00000548877 TMEM30CPA0ZSE6 113 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 RAB27BO00194 218 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 CA11O75493 328 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 CSTBP04080 98 aaKnown RBP10.38□□□□□ -0.75
CDX2-202ENST00000548877 HSPB1P04792 205 aaKnown RBP10.38□□□□□ -0.75
CDX2-202ENST00000548877 AKAIN1P0CW23 69 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 TBPP20226 339 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 HLA-DMAP28067 261 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 RPS27AP62979 156 aaKnown RBP10.38□□□□□ -0.75
CDX2-202ENST00000548877 PLA2G7Q13093 441 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 MEF2DQ14814 521 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 RSU1Q15404 277 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 SLC22A6Q4U2R8 563 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 FAM89BQ8N5H3 189 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 TMEM229BQ8NBD8 167 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 SUMF2Q8NBJ7 301 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 FLYWCH2Q96CP2 140 aaKnown RBP10.38□□□□□ -0.75
CDX2-202ENST00000548877 RAB3CQ96E17 227 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 TM2D1Q9BX74 207 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 LPAR5Q9H1C0 372 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 HRASLSQ9HDD0 168 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 KLK11Q9UBX7 282 aa10.38□□□□□ -0.75
CDX2-202ENST00000548877 SLC31A2O15432 143 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 SOX15O60248 233 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 PRAF2O60831 178 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 TCRBP04435 133 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 GTF2F2P13984 249 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 MGMTP16455 207 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 ZNF134P52741 427 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 GNG2P59768 71 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 MMDQ15546 238 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 PIGYQ3MUY2 71 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 CDNFQ49AH0 187 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 CT45A1Q5HYN5 189 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 OR10K2Q6IF99 312 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 TCTEX1D1Q8N7M0 179 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 NPBQ8NG41 125 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 CT45A3Q8NHU0 189 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 RBMXL1Q96E39 390 aaKnown RBP10.37□□□□□ -0.75
CDX2-202ENST00000548877 NEURL2Q9BR09 285 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 ELOVL1Q9BW60 279 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 KCNK15Q9H427 330 aa10.37□□□□□ -0.75
CDX2-202ENST00000548877 HMX3A6NHT5 357 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 NDUFA3O95167 84 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 MT-ND4P03905 459 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 HIST1H1DP16402 221 aaKnown RBP10.36□□□□□ -0.75
CDX2-202ENST00000548877 BLVRBP30043 206 aaPredicted RBP10.36□□□□□ -0.75
CDX2-202ENST00000548877 TATDN3Q17R31 274 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 C5orf64Q2M2E5 130 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 ACTBL2Q562R1 376 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 LINC00596Q86U02 117 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 IFT46Q9NQC8 304 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 PARP11Q9NR21 331 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 MCUBQ9NWR8 336 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 ZNF581Q9P0T4 197 aa10.36□□□□□ -0.75
CDX2-202ENST00000548877 FOXA2Q9Y261 457 aaPredicted RBP10.36□□□□□ -0.75
CDX2-202ENST00000548877 IGHV3-43A0A0B4J1X8 118 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 FAM90A7PA6NKC0 464 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 FAM90A23PA8MXZ1 464 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 NBR2O15453 112 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 H2AFB2P0C5Z0 115 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 IGHV3-43DP0DP04 118 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 SERPINA2P20848 420 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 BTCP35070 178 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 RBMS2Q15434 407 aaKnown RBP10.35□□□□□ -0.75
CDX2-202ENST00000548877 ZNF660Q6AZW8 331 aaPredicted RBP10.35□□□□□ -0.75
CDX2-202ENST00000548877 LIN54Q6MZP7 749 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 STEAP1BQ6NZ63 245 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 LINC00322Q6ZN03 302 aaPredicted RBP10.35□□□□□ -0.75
CDX2-202ENST00000548877 ZNF497Q6ZNH5 498 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 RITA1Q96K30 269 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 RHOVQ96L33 236 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 SELENOIQ9C0D9 397 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 RAB9BQ9NP90 201 aa10.35□□□□□ -0.75
CDX2-202ENST00000548877 NUDT15Q9NV35 164 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms