RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 NECAP2Q9NVZ3 263 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 TAS2R8Q9NYW2 309 aa12.32□□□□□ -0.44
DDX54-205ENST00000548786 SRRM4A7MD48 611 aaKnown RBP12.31□□□□□ -0.44
DDX54-205ENST00000548786 CCL24O00175 119 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 ARPC1BO15143 372 aaKnown RBP12.31□□□□□ -0.44
DDX54-205ENST00000548786 TNFSF12O43508 249 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 SOX15O60248 233 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 FCGR3BO75015 233 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 SPDEFO95238 335 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 CNIH1O95406 144 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 IGLV2-14P01704 120 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 RORCP51449 518 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 RPL30P62888 115 aaKnown RBP12.31□□□□□ -0.44
DDX54-205ENST00000548786 FXYD3Q14802 87 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 UNQ5815/PRO19632Q6UWF5 114 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 ANKRD13BQ86YJ7 626 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 SNX29P2Q8IUI4 249 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 RNF152Q8N8N0 203 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 LFNGQ8NES3 379 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 WFDC9Q8NEX5 89 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 TCTEX1D2Q8WW35 142 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 DDB2Q92466 427 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 KCTD12Q96CX2 325 aaKnown RBP12.31□□□□□ -0.44
DDX54-205ENST00000548786 ADTRPQ96IZ2 230 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 ZNF580Q9UK33 172 aa12.31□□□□□ -0.44
DDX54-205ENST00000548786 FOXA2Q9Y261 457 aaPredicted RBP12.31□□□□□ -0.44
DDX54-205ENST00000548786 RBMX2Q9Y388 322 aaKnown RBP12.31□□□□□ -0.44
DDX54-205ENST00000548786 APELAP0DMC3 54 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 ELK1P19419 428 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 CBX5P45973 191 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 TAGLNQ01995 201 aaKnown RBP12.3□□□□□ -0.44
DDX54-205ENST00000548786 TMEM177Q53S58 311 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 ACTBL2Q562R1 376 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 RNASE12Q5GAN4 147 aaKnown RBP12.3□□□□□ -0.44
DDX54-205ENST00000548786 TMEM17Q86X19 198 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 MINDY2Q8NBR6 621 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 MS4A10Q96PG2 267 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 CCL28Q9NRJ3 127 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 DNAH3Q8TD57 4116 aa12.3□□□□□ -0.44
DDX54-205ENST00000548786 FAM25AB3EWG3 89 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 FAM25CB3EWG5 89 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 FAM25GB3EWG6 89 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 PPYP01298 95 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 IGLV1-40P01703 118 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 PMP2P02689 132 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 RRASP10301 218 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 HOXD3P31249 432 aaPredicted RBP12.29□□□□□ -0.44
DDX54-205ENST00000548786 PRSS3P35030 304 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 MYCNOSP40205 109 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 CDX1P47902 265 aaPredicted RBP12.29□□□□□ -0.44
DDX54-205ENST00000548786 LGALS7P47929 136 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 RFX2P48378 723 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 ALDH3B2P48448 385 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 RAB9AP51151 201 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 SSBP2P81877 361 aaPredicted RBP12.29□□□□□ -0.44
DDX54-205ENST00000548786 CDK10Q15131 360 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 C19orf54Q5BKX5 351 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 KPRPQ5T749 579 aaPredicted RBP12.29□□□□□ -0.44
DDX54-205ENST00000548786 FOXB2Q5VYV0 432 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 ZNF562Q6V9R5 426 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 VKORC1L1Q8N0U8 176 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 OR5AP2Q8NGF4 316 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 C4orf3Q8WVX3 66 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 P2RX4Q99571 388 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 SLC5A7Q9GZV3 580 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 ALX4Q9H161 411 aaPredicted RBP12.29□□□□□ -0.44
DDX54-205ENST00000548786 EHFQ9NZC4 300 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 NUBP2Q9Y5Y2 271 aa12.29□□□□□ -0.44
DDX54-205ENST00000548786 SMIM31A0A1B0GVY4 71 aa12.28□□□□□ -0.44
DDX54-205ENST00000548786 APOA1P02647 267 aa12.28□□□□□ -0.44
DDX54-205ENST00000548786 CRYGBP07316 175 aa12.28□□□□□ -0.44
DDX54-205ENST00000548786 TMEM267Q0VDI3 215 aaPredicted RBP12.28□□□□□ -0.44
DDX54-205ENST00000548786 KIAA0141Q14154 515 aaPredicted RBP12.28□□□□□ -0.44
DDX54-205ENST00000548786 VMA21Q3ZAQ7 101 aa12.28□□□□□ -0.44
DDX54-205ENST00000548786 CLVS1Q8IUQ0 354 aaPredicted RBP12.28□□□□□ -0.44
DDX54-205ENST00000548786 ZNF491Q8N8L2 437 aa12.28□□□□□ -0.44
DDX54-205ENST00000548786 OR5T1Q8NG75 326 aa12.28□□□□□ -0.44
DDX54-205ENST00000548786 RCC1LQ96I51 464 aaKnown RBP12.28□□□□□ -0.44
DDX54-205ENST00000548786 ZNF355PQ9NSJ1 428 aa12.28□□□□□ -0.44
DDX54-205ENST00000548786 PRELID3BQ9Y3B1 194 aa12.28□□□□□ -0.44
DDX54-205ENST00000548786 SLC22A5O76082 557 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 IGHV3-11P01762 117 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 SAA1P0DJI8 122 aaPredicted RBP12.27□□□□□ -0.45
DDX54-205ENST00000548786 HLA-DMAP28067 261 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 SLC6A1P30531 599 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 CRIP2P52943 208 aaPredicted RBP12.27□□□□□ -0.45
DDX54-205ENST00000548786 TPPP2P59282 170 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 HERV-K104P61576 105 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 DEFA5Q01523 94 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 SPCS2Q15005 226 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 TNXAQ16473 311 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 MZT2AQ6P582 158 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 OR11H1Q8NG94 326 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 OR5H2Q8NGV7 314 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 MYOZ3Q8TDC0 251 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 ACOT12Q8WYK0 555 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 PHB2Q99623 299 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 HSD17B10Q99714 261 aaKnown RBP12.27□□□□□ -0.45
DDX54-205ENST00000548786 VSIG4Q9Y279 399 aa12.27□□□□□ -0.45
DDX54-205ENST00000548786 SULT1C2O00338 296 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms