RNA–Protein interactions for RNA: ENST00000548420.1

PTCH1-217, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 553 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-217ENST00000548420 KLHL30-AS1Q8NEE0 82 aa10.81□□□□□ -0.68
PTCH1-217ENST00000548420 S100A16Q96FQ6 103 aaKnown RBP10.81□□□□□ -0.68
PTCH1-217ENST00000548420 GINS4Q9BRT9 223 aa10.81□□□□□ -0.68
PTCH1-217ENST00000548420 GON7Q9BXV9 100 aa10.81□□□□□ -0.68
PTCH1-217ENST00000548420 MRPS26Q9BYN8 205 aaKnown RBP10.81□□□□□ -0.68
PTCH1-217ENST00000548420 ANXA10Q9UJ72 324 aa10.81□□□□□ -0.68
PTCH1-217ENST00000548420 DNAH2Q9P225 4427 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 IGHV7-81A0A0B4J1V7 117 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 NUDT19A8MXV4 375 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 CCL24O00175 119 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 RRHO14718 337 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 TUSC2O75896 110 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 GABARAPO95166 117 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 HLA-DQB1P01920 261 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 IGKV1-16P04430 117 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 SLC35B1P78383 322 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 TAGLNQ01995 201 aaKnown RBP10.8□□□□□ -0.68
PTCH1-217ENST00000548420 UBE2NLQ5JXB2 153 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 LIN54Q6MZP7 749 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 HOGA1Q86XE5 327 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 PDPNQ86YL7 162 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 CMTM3Q96MX0 182 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 NAA50Q9GZZ1 169 aaKnown RBP10.8□□□□□ -0.68
PTCH1-217ENST00000548420 OR2D2Q9H210 308 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 ZFP57Q9NU63 452 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 PLA2G2EQ9NZK7 142 aa10.8□□□□□ -0.68
PTCH1-217ENST00000548420 M0R1X1 148 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 IGHG4P01861 327 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 PPIFP30405 207 aaKnown RBP10.79□□□□□ -0.68
PTCH1-217ENST00000548420 CRIP2P52943 208 aaPredicted RBP10.79□□□□□ -0.68
PTCH1-217ENST00000548420 PSG5Q15238 335 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 DEFB136Q30KP8 78 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 TEX38Q6PEX7 206 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 GVQW1Q8N7I0 195 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 SAMD12Q8N8I0 201 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 BEST4Q8NFU0 473 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 OR5M8Q8NGP6 311 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 OR51J1Q9H342 316 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 KIAA1456Q9P272 454 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 OR2W1Q9Y3N9 320 aa10.79□□□□□ -0.68
PTCH1-217ENST00000548420 TNCP24821 2201 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 H7C2Y5 167 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 FCN1O00602 326 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 IGLV2-14P01704 120 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 ELANEP08246 267 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 PTHLHP12272 177 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 NFYAP23511 347 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-217ENST00000548420 SLC6A1P30531 599 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 DUTP33316 252 aaKnown RBP10.78□□□□□ -0.68
PTCH1-217ENST00000548420 CBX5P45973 191 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 FOXE3Q13461 319 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 C19orf54Q5BKX5 351 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 ZNF660Q6AZW8 331 aaPredicted RBP10.78□□□□□ -0.68
PTCH1-217ENST00000548420 IL17DQ8TAD2 202 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 ACOT12Q8WYK0 555 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 FBXL15Q9H469 300 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 SLC35D1Q9NTN3 355 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 ANAPC10Q9UM13 185 aa10.78□□□□□ -0.68
PTCH1-217ENST00000548420 IGKV1D-13A0A0B4J2D9 117 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 SLC22A5O76082 557 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 SPDEFO95238 335 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 IGLV2-23P01705 113 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 APOA1P02647 267 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 APOA2P02652 100 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 CRYGBP07316 175 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 OR5H8P0DN80 308 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 IGKV1-13P0DP09 117 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 EGR2P11161 476 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-217ENST00000548420 PSMB8P28062 276 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 LGALS7P47929 136 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 RORCP51449 518 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 RPS16P62249 146 aaKnown RBP10.77□□□□□ -0.69
PTCH1-217ENST00000548420 CX3CL1P78423 397 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 EIF4EBP1Q13541 118 aaPredicted RBP10.77□□□□□ -0.69
PTCH1-217ENST00000548420 TMEM177Q53S58 311 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 GPR107Q5VW38 600 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 ZNF562Q6V9R5 426 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 ZNF695Q8IW36 515 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 ZNF645Q8N7E2 425 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 MINDY2Q8NBR6 621 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 MYOZ3Q8TDC0 251 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 SNAPC3Q92966 411 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 FLYWCH2Q96CP2 140 aaKnown RBP10.77□□□□□ -0.69
PTCH1-217ENST00000548420 ADTRPQ96IZ2 230 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 TSNAXQ99598 290 aaKnown RBP10.77□□□□□ -0.69
PTCH1-217ENST00000548420 C19orf73Q9NVV2 129 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 RBM7Q9Y580 266 aaKnown RBP10.77□□□□□ -0.69
PTCH1-217ENST00000548420 NUBP2Q9Y5Y2 271 aa10.77□□□□□ -0.69
PTCH1-217ENST00000548420 LINC00473A8K010 186 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 ATP6V0E1O15342 81 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 IGLV1-40P01703 118 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 EIF4EP06730 217 aaKnown RBP10.76□□□□□ -0.69
PTCH1-217ENST00000548420 RRASP10301 218 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 NAT1P18440 290 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 VDAC1P21796 283 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 CDX1P47902 265 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-217ENST00000548420 TAS2R20P59543 309 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 NDPQ00604 133 aa10.76□□□□□ -0.69
PTCH1-217ENST00000548420 KIAA0141Q14154 515 aaPredicted RBP10.76□□□□□ -0.69
PTCH1-217ENST00000548420 GIMAP1Q8WWP7 306 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms