RNA–Protein interactions for RNA: ENST00000547530.6

BRF1-211, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRF1, Length 3,358 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-211ENST00000547530 ETFRF1Q6IPR1 90 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 ZNF573Q86YE8 665 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 OR8I2Q8N0Y5 310 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 KDF1Q8NAX2 398 aaPredicted RBP12.79□□□□□ -0.36
BRF1-211ENST00000547530 MAFAQ8NHW3 353 aaPredicted RBP12.79□□□□□ -0.36
BRF1-211ENST00000547530 OR6C3Q9NZP0 311 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 MRPS17Q9Y2R5 130 aaKnown RBP12.79□□□□□ -0.36
BRF1-211ENST00000547530 ABCA4P78363 2273 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 MSMO1Q15800 293 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 ABHD17BQ5VST6 288 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 GGNQ86UU5 652 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 ST6GALNAC6Q969X2 333 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 SSBP3Q9BWW4 388 aaPredicted RBP12.79□□□□□ -0.36
BRF1-211ENST00000547530 LAMA5O15230 3695 aa12.79□□□□□ -0.36
BRF1-211ENST00000547530 CLDN14O95500 239 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 MMDQ15546 238 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 GALMQ96C23 342 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 C10orf35Q96D05 121 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 CTXND1A0A1B0GTU2 59 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 RBFOX2O43251 390 aaKnown RBP eCLIP12.78□□□□□ -0.361e-8■■■■□ 22.2
BRF1-211ENST00000547530 KLF7O75840 302 aaPredicted RBP12.78□□□□□ -0.36
BRF1-211ENST00000547530 APELAP0DMC3 54 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 HOXA6P31267 233 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 GNB1P62873 340 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 SPATA31B1PQ5VZV4 182 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 QTRT1Q9BXR0 403 aaKnown RBP12.78□□□□□ -0.36
BRF1-211ENST00000547530 CDH20Q9HBT6 801 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 IGHV3OR15-7A0A075B7D8 119 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 OR7C2O60412 319 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 HINT1P49773 126 aaPredicted RBP12.78□□□□□ -0.36
BRF1-211ENST00000547530 OR8B8Q15620 311 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 HLA-DRB5Q30154 266 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 ARSJQ5FYB0 599 aaPredicted RBP12.78□□□□□ -0.36
BRF1-211ENST00000547530 KMT5CQ86Y97 462 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 OR4P4Q8NGL7 312 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 FAM216AQ8WUB2 273 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 REPIN1Q9BWE0 567 aaKnown RBP12.78□□□□□ -0.36
BRF1-211ENST00000547530 CTDSP1Q9GZU7 261 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 CLCF1Q9UBD9 225 aa12.78□□□□□ -0.36
BRF1-211ENST00000547530 B4E171 279 aa12.77□□□□□ -0.36
BRF1-211ENST00000547530 PSPNO60542 156 aa12.77□□□□□ -0.36
BRF1-211ENST00000547530 EPHA8P29322 1005 aaPredicted RBP12.77□□□□□ -0.36
BRF1-211ENST00000547530 TSPAN7P41732 249 aa12.77□□□□□ -0.36
BRF1-211ENST00000547530 MDP1Q86V88 176 aa12.77□□□□□ -0.36
BRF1-211ENST00000547530 OR4A16Q8NH70 328 aa12.77□□□□□ -0.36
BRF1-211ENST00000547530 NPCDR1Q9BY65 106 aa12.77□□□□□ -0.36
BRF1-211ENST00000547530 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.77□□□□□ -0.36
BRF1-211ENST00000547530 CPAMD8Q8IZJ3 1885 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 IGLV3-12A0A075B6K2 115 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 M0R1X1 148 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 SRD5A2P31213 254 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 SERF2P84101 59 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 TRA2AQ13595 282 aaKnown RBP eCLIP12.77□□□□□ -0.37
BRF1-211ENST00000547530 ATP1A1-AS1Q5TC04 95 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 C11orf42Q8N5U0 333 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 SIGLECL1Q8N7X8 197 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 SCCPDHQ8NBX0 429 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 OR1L6Q8NGR2 347 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 NOL4LQ96MY1 436 aaPredicted RBP12.77□□□□□ -0.37
BRF1-211ENST00000547530 ACACAQ13085 2346 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 OCC1Q8TAD7 63 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 UHRF2Q96PU4 802 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 LRFN3Q9BTN0 628 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 TMEM208Q9BTX3 173 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 TMEM147Q9BVK8 224 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 METRNQ9UJH8 293 aa12.77□□□□□ -0.37
BRF1-211ENST00000547530 SH2D1BO14796 132 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 FOXH1O75593 365 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 UBE2NP61088 152 aaKnown RBP12.76□□□□□ -0.37
BRF1-211ENST00000547530 ACOT6Q3I5F7 207 aaPredicted RBP12.76□□□□□ -0.37
BRF1-211ENST00000547530 PLEKHA3Q9HB20 300 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 PLSCR2Q9NRY7 297 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 SIAH2O43255 324 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 CAMPP49913 170 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 RND2P52198 227 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 Q0VFX4 171 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 FAM201AQ5SY85 155 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 TMEM42Q69YG0 159 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 LCN12Q6JVE5 192 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 OR10G8Q8NGN5 311 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 TMEM170AQ8WVE7 144 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 C2orf88Q9BSF0 95 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 RNASE7Q9H1E1 156 aaKnown RBP12.76□□□□□ -0.37
BRF1-211ENST00000547530 C11orf1Q9H5F2 150 aa12.76□□□□□ -0.37
BRF1-211ENST00000547530 A0A1B0GW64 132 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 GCGP01275 180 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 HBZP02008 142 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 RPL39P5Q59GN2 51 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 MRPL14Q6P1L8 145 aaKnown RBP12.75□□□□□ -0.37
BRF1-211ENST00000547530 OR2Y1Q8NGV0 311 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 IMMP1LQ96LU5 166 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 MRPL18Q9H0U6 180 aaKnown RBP12.75□□□□□ -0.37
BRF1-211ENST00000547530 FOXJ2Q9P0K8 574 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 YLPM1P49750 1951 aaKnown RBP12.75□□□□□ -0.37
BRF1-211ENST00000547530 TRAV3A0A0B4J244 114 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 PLAUP00749 431 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 Q6ZN92 141 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 OR5R1Q8NH85 324 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 TP73-AS1Q9UF72 201 aa12.75□□□□□ -0.37
BRF1-211ENST00000547530 RRHO14718 337 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 105.3 ms