RNA–Protein interactions for RNA: ENST00000546947.5

CCDC38-205, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 4

Gene CCDC38, Length 559 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-205ENST00000546947 DUX3Q96PT4 197 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 KLK15Q9H2R5 256 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 TPSG1Q9NRR2 321 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 FOXA2Q9Y261 457 aaPredicted RBP11.52□□□□□ -0.57
CCDC38-205ENST00000546947 VSIG4Q9Y279 399 aa11.52□□□□□ -0.57
CCDC38-205ENST00000546947 RBMX2Q9Y388 322 aaKnown RBP11.52□□□□□ -0.57
CCDC38-205ENST00000546947 CRYGBP07316 175 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 VBP1P61758 197 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 NCS1P62166 190 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 RUNX1Q01196 453 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 DEFB136Q30KP8 78 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 UNQ5815/PRO19632Q6UWF5 114 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 SAMD12Q8N8I0 201 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 OSR1Q8TAX0 266 aaPredicted RBP11.51□□□□□ -0.57
CCDC38-205ENST00000546947 ARPC1AQ92747 370 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 CMTM3Q96MX0 182 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 FAM103A1Q9BTL3 118 aaKnown RBP11.51□□□□□ -0.57
CCDC38-205ENST00000546947 PRELID3BQ9Y3B1 194 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 A3GALT2U3KPV4 340 aa11.51□□□□□ -0.57
CCDC38-205ENST00000546947 IGKV1D-13A0A0B4J2D9 117 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 I3L521 148 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 ARPC1BO15143 372 aaKnown RBP11.5□□□□□ -0.57
CCDC38-205ENST00000546947 CRYZL1O95825 349 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 PRB2P02812 416 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-205ENST00000546947 IGKV1-13P0DP09 117 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 PTHLHP12272 177 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 FXYD3Q14802 87 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 VMA21Q3ZAQ7 101 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 ACTBL2Q562R1 376 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 TMEM69Q5SWH9 247 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 KCTD9Q7L273 389 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 ANKRD13BQ86YJ7 626 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 TEX45Q8NA69 505 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 LFNGQ8NES3 379 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 OR5AP2Q8NGF4 316 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 DPF1Q92782 380 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 HSD17B10Q99714 261 aaKnown RBP11.5□□□□□ -0.57
CCDC38-205ENST00000546947 GNB4Q9HAV0 340 aa11.5□□□□□ -0.57
CCDC38-205ENST00000546947 AURKAIP1Q9NWT8 199 aaPredicted RBP11.5□□□□□ -0.57
CCDC38-205ENST00000546947 SRRM4A7MD48 611 aaKnown RBP11.49□□□□□ -0.57
CCDC38-205ENST00000546947 SOX15O60248 233 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 CNIH1O95406 144 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 IGLV2-14P01704 120 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 CD40LGP29965 261 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 FCGR2CP31995 323 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 RAB25P57735 213 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 TAS2R20P59543 309 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 UBE2KP61086 200 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 FHL3Q13643 280 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 MSMO1Q15800 293 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 OVCH2Q7RTZ1 564 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 OR11H1Q8NG94 326 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 ACOT12Q8WYK0 555 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 SNAPC3Q92966 411 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 TMEM68Q96MH6 324 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 MRPS26Q9BYN8 205 aaKnown RBP11.49□□□□□ -0.57
CCDC38-205ENST00000546947 IFT46Q9NQC8 304 aa11.49□□□□□ -0.57
CCDC38-205ENST00000546947 MRPS7Q9Y2R9 242 aaKnown RBP11.49□□□□□ -0.57
CCDC38-205ENST00000546947 FCGR3BO75015 233 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 GABARAPO95166 117 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 PPYP01298 95 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 OR8U8P0C7N1 319 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 AADACP22760 399 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 GNB1P62873 340 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 SSBP2P81877 361 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-205ENST00000546947 EGFEM1PQ0D2K5 195 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 EIF4EBP1Q13541 118 aaPredicted RBP11.48□□□□□ -0.57
CCDC38-205ENST00000546947 CDK10Q15131 360 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 ZNF66Q6ZN08 573 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 GRPEL2Q8TAA5 225 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 SLA2Q9H6Q3 261 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 COMMD3Q9UBI1 195 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 ANAPC10Q9UM13 185 aa11.48□□□□□ -0.57
CCDC38-205ENST00000546947 NOTCH3Q9UM47 2321 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 MEIS3P1A6NDR6 274 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 H3BUA1 57 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 CREBL2O60519 120 aaPredicted RBP11.47□□□□□ -0.57
CCDC38-205ENST00000546947 APOA1P02647 267 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 EIF4EP06730 217 aaKnown RBP11.47□□□□□ -0.57
CCDC38-205ENST00000546947 RORCP51449 518 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 RPL30P62888 115 aaKnown RBP11.47□□□□□ -0.57
CCDC38-205ENST00000546947 ZNF616Q08AN1 781 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 PJVKQ0ZLH3 352 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 MFSD4AQ8N468 514 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 ZBTB34Q8NCN2 500 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 OR1N2Q8NGR9 330 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 OR4S2Q8NH73 311 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 MRAPQ8TCY5 172 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 SECTM1Q8WVN6 248 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 TCTEX1D2Q8WW35 142 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 GIMAP1Q8WWP7 306 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 DCUN1D5Q9BTE7 237 aa11.47□□□□□ -0.57
CCDC38-205ENST00000546947 ZMAT5Q9UDW3 170 aaKnown RBP11.47□□□□□ -0.57
CCDC38-205ENST00000546947 SMIM31A0A1B0GVY4 71 aa11.46□□□□□ -0.57
CCDC38-205ENST00000546947 FCER2P06734 321 aa11.46□□□□□ -0.57
CCDC38-205ENST00000546947 LGALS1P09382 135 aaKnown RBP11.46□□□□□ -0.57
CCDC38-205ENST00000546947 SAA1P0DJI8 122 aaPredicted RBP11.46□□□□□ -0.57
CCDC38-205ENST00000546947 NAT1P18440 290 aa11.46□□□□□ -0.57
CCDC38-205ENST00000546947 PRSS3P35030 304 aa11.46□□□□□ -0.57
CCDC38-205ENST00000546947 KIR2DS2P43631 304 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms