RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 UAP1Q16222 522 aaPredicted RBP0.79□□□□□ -2.28
CCDC38-204ENST00000546816 ZNF791Q3KP31 576 aaPredicted RBP0.79□□□□□ -2.28
CCDC38-204ENST00000546816 HSP90B2PQ58FF3 399 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 BAP18Q8IXM2 172 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 DAND5Q8N907 189 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 OR5J2Q8NH18 312 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 ASB13Q8WXK3 278 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 SFRP2Q96HF1 295 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 PACRGQ96M98 296 aaPredicted RBP0.79□□□□□ -2.28
CCDC38-204ENST00000546816 MRPL32Q9BYC8 188 aaKnown RBP0.79□□□□□ -2.28
CCDC38-204ENST00000546816 NDEL1Q9GZM8 345 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 TMEM222Q9H0R3 208 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 EURLQ9NYK6 297 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 CCDC88CQ9P219 2028 aa0.79□□□□□ -2.28
CCDC38-204ENST00000546816 COL6A6A6NMZ7 2263 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 A0A087WUU8 490 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 TMSB15BA0A087X1C1 80 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 TRAV41A0A0B4J266 112 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 A0A1B0GVG6 124 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 TINCRA0A1B0GVN0 87 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 BHLHE40O14503 412 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 GABRA2P47869 451 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 UBE2G2P60604 165 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 FKBP1AP62942 108 aaKnown RBP0.78□□□□□ -2.28
CCDC38-204ENST00000546816 HOXC5Q00444 222 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 OR10K2Q6IF99 312 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 DNAJB3Q8WWF6 145 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 SMIM19Q96E16 107 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 CFAP53Q96M91 514 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 RETNLBQ9BQ08 111 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 TIPINQ9BVW5 301 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 SPANXB1Q9NS25 103 aaPredicted RBP0.78□□□□□ -2.28
CCDC38-204ENST00000546816 IMP3Q9NV31 184 aaKnown RBP0.78□□□□□ -2.28
CCDC38-204ENST00000546816 HHLA3Q9XRX5 114 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 POLR3HQ9Y535 204 aaPredicted RBP0.78□□□□□ -2.28
CCDC38-204ENST00000546816 MALRD1Q5VYJ5 2156 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 ABCC12Q96J65 1359 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 DISP1Q96F81 1524 aa0.78□□□□□ -2.28
CCDC38-204ENST00000546816 REREQ9P2R6 1566 aa0.78□□□□□ -2.29
CCDC38-204ENST00000546816 DSCAMO60469 2012 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 IGHV3-64A0A075B6Q5 118 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 LINC00854A0A1B0GVQ3 168 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 C5orf49A4QMS7 147 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 A8MUN3 132 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 C9JCJ5 164 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 BIRC5O15392 142 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 C1QCP02747 245 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 IL6P05231 212 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 BPGMP07738 259 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 OCMP0CE72 109 aaPredicted RBP0.77□□□□□ -2.29
CCDC38-204ENST00000546816 LYNX1P0DP58 116 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 IFNGR2P38484 337 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 RPL27AP46776 148 aaKnown RBP0.77□□□□□ -2.29
CCDC38-204ENST00000546816 TBPL1P62380 186 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 HLA-DRB3P79483 266 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 ERHP84090 104 aaKnown RBP0.77□□□□□ -2.29
CCDC38-204ENST00000546816 JOSD1Q15040 202 aaPredicted RBP0.77□□□□□ -2.29
CCDC38-204ENST00000546816 PLPPR5Q32ZL2 321 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 SLC35E3Q7Z769 313 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 COA5Q86WW8 74 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 GPHB5Q86YW7 130 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 FUNDC1Q8IVP5 155 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 PACRGLQ8N7B6 248 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 RNF133Q8WVZ7 376 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 ASB17Q8WXJ9 295 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 ZNF514Q96K75 400 aaPredicted RBP0.77□□□□□ -2.29
CCDC38-204ENST00000546816 TMEM109Q9BVC6 243 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 HES4Q9HCC6 221 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 GRIN2BQ13224 1484 aa0.77□□□□□ -2.29
CCDC38-204ENST00000546816 TMED7-TICAM2A0A0A6YYA0 188 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 RFPL4AA6NLU0 287 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 RFPL4AL1F8VTS6 287 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 ZNF705DP0CH99 300 aaPredicted RBP0.76□□□□□ -2.29
CCDC38-204ENST00000546816 ZNF705BP0CI00 300 aaPredicted RBP0.76□□□□□ -2.29
CCDC38-204ENST00000546816 UGT2B7P16662 529 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 CDK9P50750 372 aaKnown RBP0.76□□□□□ -2.29
CCDC38-204ENST00000546816 CXCR4P61073 352 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 GNA12Q03113 381 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 MIAQ16674 131 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 OR1L8Q8NGR8 309 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 ZNF675Q8TD23 568 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 NMNAT3Q96T66 252 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 DHRS9Q9BPW9 319 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 C7orf50Q9BRJ6 194 aaKnown RBP0.76□□□□□ -2.29
CCDC38-204ENST00000546816 DCUN1D5Q9BTE7 237 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 TTTY13Q9BZ97 58 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 DERL2Q9GZP9 239 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 VCX3BQ9H321 246 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 TAAR3PQ9P1P4 343 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 SCN9AQ15858 1988 aa0.76□□□□□ -2.29
CCDC38-204ENST00000546816 RTTNQ86VV8 2226 aa0.75□□□□□ -2.29
CCDC38-204ENST00000546816 F5H768 121 aa0.75□□□□□ -2.29
CCDC38-204ENST00000546816 F8W036 122 aa0.75□□□□□ -2.29
CCDC38-204ENST00000546816 TXNDC9O14530 226 aa0.75□□□□□ -2.29
CCDC38-204ENST00000546816 ITGB1BP1O14713 200 aa0.75□□□□□ -2.29
CCDC38-204ENST00000546816 COCHO43405 550 aa0.75□□□□□ -2.29
CCDC38-204ENST00000546816 APOMO95445 188 aa0.75□□□□□ -2.29
CCDC38-204ENST00000546816 KRT75O95678 551 aa0.75□□□□□ -2.29
CCDC38-204ENST00000546816 HLA-DRAP01903 254 aa0.75□□□□□ -2.29
CCDC38-204ENST00000546816 HLA-DQB2P05538 268 aa0.75□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms