RNA–Protein interactions for RNA: ENST00000546084.5

TRAF1-203, Transcript of TNF receptor associated factor 1, humanhuman

TSL 2 BASIC

Gene TRAF1, Length 3,715 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-203ENST00000546084 CENPEQ02224 2701 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 SCGB1D1O95968 90 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 CRYGSP22914 178 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 PSMB3P49720 205 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 THBS3P49746 956 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 RIPPLY2Q5TAB7 128 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 PRR27Q6MZM9 219 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 SPSB3Q6PJ21 355 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 NUDT10Q8NFP7 164 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 MALSU1Q96EH3 234 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 LRFN3Q9BTN0 628 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 ZNF320A2RRD8 509 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 PGPEP1LA6NFU8 196 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 FOXI3A8MTJ6 420 aaPredicted RBP8.3□□□□□ -1.08
TRAF1-203ENST00000546084 S1PR2O95136 353 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 HBZP02008 142 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 WNT5AP41221 380 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 NUTF2P61970 127 aaKnown RBP8.3□□□□□ -1.08
TRAF1-203ENST00000546084 GNB1P62873 340 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 FOXF2Q12947 444 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 LEMD1Q68G75 181 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 SLC24A4Q8NFF2 622 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 OR5A2Q8NGI9 324 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 OR4D5Q8NGN0 318 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 ATP5SQ99766 215 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 SCRT1Q9BWW7 348 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 SMDT1Q9H4I9 107 aa8.3□□□□□ -1.08
TRAF1-203ENST00000546084 USP9YO00507 2555 aaPredicted RBP8.3□□□□□ -1.08
TRAF1-203ENST00000546084 SONP18583 2426 aaKnown RBP8.29□□□□□ -1.08
TRAF1-203ENST00000546084 H0Y8G0 127 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 OR7C2O60412 319 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 CTXN2P0C2S0 81 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 LHX2P50458 406 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 UCP2P55851 309 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 RPL19P84098 196 aaKnown RBP8.29□□□□□ -1.08
TRAF1-203ENST00000546084 COL10A1Q03692 680 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 ZFP36L1Q07352 338 aaKnown RBP8.29□□□□□ -1.08
TRAF1-203ENST00000546084 KCNMB1Q16558 191 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 GCSAMLQ5JQS6 135 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 ZNF66Q6ZN08 573 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 OR5D13Q8NGL4 314 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 KLF14Q8TD94 323 aaPredicted RBP8.29□□□□□ -1.08
TRAF1-203ENST00000546084 GUCD1Q96NT3 240 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 FAM103A1Q9BTL3 118 aaKnown RBP8.29□□□□□ -1.08
TRAF1-203ENST00000546084 PROCRQ9UNN8 238 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 ATP23Q9Y6H3 246 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 A8MXE2 369 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 PPP5D1E7EU14 171 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 TMPRSS2O15393 492 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 PLAUP00749 431 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 HIST1H1BP16401 226 aaKnown RBP8.29□□□□□ -1.08
TRAF1-203ENST00000546084 PSG7Q13046 419 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 NCR3LG1Q68D85 454 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 Q6ZRM9 215 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 C1QL4Q86Z23 238 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 ABHD12Q8N2K0 398 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 OR10G4Q8NGN3 311 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 OR10G9Q8NGN4 311 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 OR10G7Q8NGN6 311 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 SSC4DQ8WTU2 575 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 WDYHV1Q96HA8 205 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 OR51I2Q9H344 312 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 DYNLRB1Q9NP97 96 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 LIN7CQ9NUP9 197 aaKnown RBP8.29□□□□□ -1.08
TRAF1-203ENST00000546084 METRNQ9UJH8 293 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 DYSFO75923 2080 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 TRAV24A0A0B4J272 114 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 TMEM30CPA0ZSE6 113 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 IFITM10A6NMD0 228 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 ARL3P36405 182 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 CLDN18P56856 261 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 TAS2R30P59541 319 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 PLGLAQ15195 96 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 RPL39P5Q59GN2 51 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 SLC25A53Q5H9E4 307 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 CRIP3Q6Q6R5 217 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 DRAM1Q8N682 238 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 C10orf35Q96D05 121 aa8.29□□□□□ -1.08
TRAF1-203ENST00000546084 REPIN1Q9BWE0 567 aaKnown RBP8.29□□□□□ -1.08
TRAF1-203ENST00000546084 J3QT63 122 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 TMEM50AO95807 157 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 KITLGP21583 273 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 RNPS1Q15287 305 aaKnown RBP8.28□□□□□ -1.08
TRAF1-203ENST00000546084 VAMP3Q15836 100 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 SLC35E3Q7Z769 313 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 OR13D1Q8NGV5 346 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 CLDND2Q8NHS1 167 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 C2CD3Q4AC94 2353 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 WNK1Q9H4A3 2382 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 B3GALT5-AS1P59052 145 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 HERPUD1Q15011 391 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 HIST3H2BBQ8N257 126 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 LRTM2Q8N967 370 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 GPR87Q9BY21 358 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 RBKSQ9H477 322 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 PIEZO1Q92508 2521 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 ELOA3CA0A087WX78 387 aaPredicted RBP8.28□□□□□ -1.08
TRAF1-203ENST00000546084 LOC102723996A0A087X1L8 192 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 C17orf98A8MV24 154 aa8.28□□□□□ -1.08
TRAF1-203ENST00000546084 PSPNO60542 156 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms