RNA–Protein interactions for RNA: ENST00000546073.5

CD9-211, Transcript of CD9 molecule, humanhuman

TSL 2

Gene CD9, Length 1,072 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-211ENST00000546073 IGHG2P01859 326 aa13.89□□□□□ -0.19
CD9-211ENST00000546073 PGAM2P15259 253 aa13.89□□□□□ -0.19
CD9-211ENST00000546073 ECI1P42126 302 aa13.89□□□□□ -0.19
CD9-211ENST00000546073 STEAP1BQ6NZ63 245 aa13.89□□□□□ -0.19
CD9-211ENST00000546073 OR5AU1Q8NGC0 362 aa13.89□□□□□ -0.19
CD9-211ENST00000546073 VSTM2AQ8TAG5 236 aa13.89□□□□□ -0.19
CD9-211ENST00000546073 MOB3AQ96BX8 217 aa13.89□□□□□ -0.19
CD9-211ENST00000546073 SERTAD4Q9NUC0 356 aa13.89□□□□□ -0.19
CD9-211ENST00000546073 CUBNO60494 3623 aa13.89□□□□□ -0.19
CD9-211ENST00000546073 IGKV1D-13A0A0B4J2D9 117 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 GPR31O00270 319 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 TNFSF12O43508 249 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 CD3DP04234 171 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 AKAIN1P0CW23 69 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 IGKV1-13P0DP09 117 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 DGCR2P98153 550 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 SCGB2B2Q4G0G5 96 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 ZNF660Q6AZW8 331 aaPredicted RBP13.88□□□□□ -0.19
CD9-211ENST00000546073 SLC38A6Q8IZM9 456 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 FAM71E2Q8N5Q1 922 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 ZFAND1Q8TCF1 268 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 FBXL15Q9H469 300 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 BATF3Q9NR55 127 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 PLSCR3Q9NRY6 295 aa13.88□□□□□ -0.19
CD9-211ENST00000546073 M0QYG6 137 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 GSTZ1O43708 216 aaPredicted RBP13.87□□□□□ -0.19
CD9-211ENST00000546073 PROP1O75360 226 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 NDUFA3O95167 84 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 HLA-DRB1P01911 266 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 IGKV1-16P04430 117 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 AMY1AP04745 511 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 AMY2AP04746 511 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 PSG5Q15238 335 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 C2orf68Q2NKX9 166 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 TMEM177Q53S58 311 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 KHDC1LQ5JSQ8 128 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 SCGB3A2Q96PL1 93 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 CLCC1Q96S66 551 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 THAP7Q9BT49 309 aaPredicted RBP13.87□□□□□ -0.19
CD9-211ENST00000546073 PARP11Q9NR21 331 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 SCP2D1Q9UJQ7 156 aa13.87□□□□□ -0.19
CD9-211ENST00000546073 TCRBV4S1A1TA0A5B7 111 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 SLC25A17O43808 307 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 ERVK-16P61578 105 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 OR2B11Q5JQS5 317 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 TEX38Q6PEX7 206 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 TMEM65Q6PI78 240 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 Q6ZS46 218 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 PPP1R27Q86WC6 154 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 Q8N402 240 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 STPG2Q8N412 459 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 TCTEX1D1Q8N7M0 179 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 PRRT1Q99946 306 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 CITED1Q99966 193 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 OR51J1Q9H342 316 aa13.86□□□□□ -0.19
CD9-211ENST00000546073 CNTFRP26992 372 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 UCP3P55916 312 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 GNB1P62873 340 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 TMEM95Q3KNT9 176 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 ZNF818PQ6ZRF7 136 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 SPAG16Q8N0X2 631 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 TOMM5Q8N4H5 51 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 C11orf44Q8N8P7 122 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 CCDC71LQ8N9Z2 235 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 TEX45Q8NA69 505 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 OR51H1Q8NH63 302 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 ZNF486Q96H40 463 aaPredicted RBP13.85□□□□□ -0.19
CD9-211ENST00000546073 WNT10AQ9GZT5 417 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 MCUBQ9NWR8 336 aa13.85□□□□□ -0.19
CD9-211ENST00000546073 C14orf166Q9Y224 244 aaKnown RBP13.85□□□□□ -0.19
CD9-211ENST00000546073 LINC00473A8K010 186 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 HPRT1P00492 218 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 GNRHRP30968 328 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 LINC00205P59089 165 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 UBE2KP61086 200 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 FBLN7Q53RD9 439 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 CXorf66Q5JRM2 361 aaPredicted RBP13.84□□□□□ -0.19
CD9-211ENST00000546073 TRIQKQ629K1 86 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 ZNF562Q6V9R5 426 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 TERB2Q8NHR7 220 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 DDB2Q92466 427 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 RITA1Q96K30 269 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 PHB2Q99623 299 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 TINAGL1Q9GZM7 467 aaPredicted RBP13.84□□□□□ -0.19
CD9-211ENST00000546073 COPZ2Q9P299 210 aa13.84□□□□□ -0.19
CD9-211ENST00000546073 RBFOX2O43251 390 aaKnown RBP eCLIP13.83□□□□□ -0.2
CD9-211ENST00000546073 ATG12O94817 140 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 CA2P00918 260 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 CD74P04233 296 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 RLN1P04808 185 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 NDUFA11Q86Y39 141 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 DMBX1Q8NFW5 382 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 OR4F17Q8NGA8 305 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 OR6Q1Q8NGQ2 317 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 OR4F4Q96R69 305 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 LINC00527Q9UJ94 153 aa13.83□□□□□ -0.2
CD9-211ENST00000546073 TSSC4Q9Y5U2 329 aaPredicted RBP13.83□□□□□ -0.2
CD9-211ENST00000546073 TRAV41A0A0B4J266 112 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 MPPED1O15442 326 aa13.82□□□□□ -0.2
CD9-211ENST00000546073 PGLYRP1O75594 196 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms