RNA–Protein interactions for RNA: ENST00000545608.5

USP28-215, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 5

Gene USP28, Length 733 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-215ENST00000545608 DEFA3P59666 94 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 HLA-DRB3P79483 266 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 TMEM267Q0VDI3 215 aaPredicted RBP6.51□□□□□ -1.37
USP28-215ENST00000545608 P2RY14Q15391 338 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 SPHARQ15513 63 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 AKIRIN2Q53H80 203 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 ACTBL2Q562R1 376 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 ZNF562Q6V9R5 426 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 TMEM91Q6ZNR0 172 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 ANKRD13BQ86YJ7 626 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 WFDC3Q8IUB2 231 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 FAM89BQ8N5H3 189 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 TCTEX1D1Q8N7M0 179 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 ZNF383Q8NA42 475 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 LFNGQ8NES3 379 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 OR6M1Q8NGM8 313 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 OR13F1Q8NGS4 319 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 TMEM203Q969S6 136 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 RCHY1Q96PM5 261 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 RNF5Q99942 180 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 MND1Q9BWT6 205 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 RIMS4Q9H426 269 aaPredicted RBP6.51□□□□□ -1.37
USP28-215ENST00000545608 Q9N2K0 584 aa6.51□□□□□ -1.37
USP28-215ENST00000545608 METTL1Q9UBP6 276 aaKnown RBP6.51□□□□□ -1.37
USP28-215ENST00000545608 AK6Q9Y3D8 172 aaKnown RBP6.51□□□□□ -1.37
USP28-215ENST00000545608 IGKV1-6A0A0C4DH72 117 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 FAM25AB3EWG3 89 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 FAM25CB3EWG5 89 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 FAM25GB3EWG6 89 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 ARPC1BO15143 372 aaKnown RBP6.5□□□□□ -1.37
USP28-215ENST00000545608 HSPA12AO43301 675 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 CA2P00918 260 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 APOA1P02647 267 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 IGKV1-16P04430 117 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 FRMD6-AS1P0C7T7 363 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 ZBTB25P24278 435 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 VEGFCP49767 419 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 TPPP2P59282 170 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 RPS16P62249 146 aaKnown RBP6.5□□□□□ -1.37
USP28-215ENST00000545608 IRF3Q14653 427 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 SPCS2Q15005 226 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 MED22Q15528 200 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 CT83Q5H943 113 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 TOR2AQ5JU69 321 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 LIPKQ5VXJ0 399 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 MOB1BQ7L9L4 216 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 HAPLN4Q86UW8 402 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 OR6Q1Q8NGQ2 317 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 GRPEL2Q8TAA5 225 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 MUC7Q8TAX7 377 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 PTX4Q96A99 478 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 FLYWCH2Q96CP2 140 aaKnown RBP6.5□□□□□ -1.37
USP28-215ENST00000545608 ARHGAP5-AS1Q96IT6 56 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 URM1Q9BTM9 101 aaKnown RBP6.5□□□□□ -1.37
USP28-215ENST00000545608 GHITMQ9H3K2 345 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 RYR3Q15413 4870 aa6.5□□□□□ -1.37
USP28-215ENST00000545608 SLC17A2O00624 439 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 MRPS14O60783 128 aaKnown RBP6.49□□□□□ -1.37
USP28-215ENST00000545608 TRGV3P03979 118 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 CLEC2LP0C7M8 214 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 OR8U9P0C7N5 309 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 ARSBP15848 533 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 CD40LGP29965 261 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 CLDN12P56749 244 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 RPS25P62851 125 aaKnown RBP6.49□□□□□ -1.37
USP28-215ENST00000545608 SSBP2P81877 361 aaPredicted RBP6.49□□□□□ -1.37
USP28-215ENST00000545608 PITPNAQ00169 270 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 PLA2G7Q13093 441 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 FXYD3Q14802 87 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 NEDD8Q15843 81 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 SRSF7Q16629 238 aaKnown RBP eCLIP6.49□□□□□ -1.37
USP28-215ENST00000545608 PLAC9Q5JTB6 97 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 CASC10Q5T4H9 136 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 PYHIN1Q6K0P9 492 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 OR5T1Q8NG75 326 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 UFD1Q92890 307 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 OR4C12Q96R67 309 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 TSNAXQ99598 290 aaKnown RBP6.49□□□□□ -1.37
USP28-215ENST00000545608 CMSS1Q9BQ75 279 aaKnown RBP6.49□□□□□ -1.37
USP28-215ENST00000545608 PECRQ9BY49 303 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 C19orf73Q9NVV2 129 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 RDH8Q9NYR8 311 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 ZNF221Q9UK13 617 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 HSF4Q9ULV5 492 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 MGAT4AQ9UM21 535 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 STAB2Q8WWQ8 2551 aa6.49□□□□□ -1.37
USP28-215ENST00000545608 TRDCB7Z8K6 153 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 M0R1X1 148 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 LDLRAD4O15165 306 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 SLC25A17O43808 307 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 SPDEFO95238 335 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 PTTG1O95997 202 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 IGLV2-23P01705 113 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 CRYGBP07316 175 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 CD3GP09693 182 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 HSMCR30P0CW71 290 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 ZNF182P17025 639 aaPredicted RBP6.48□□□□□ -1.37
USP28-215ENST00000545608 PJVKQ0ZLH3 352 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 TPBGQ13641 420 aa6.48□□□□□ -1.37
USP28-215ENST00000545608 RAB11BQ15907 218 aa6.48□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms