RNA–Protein interactions for RNA: ENST00000545354.1

UBE4A-203, Transcript of ubiquitination factor E4A, humanhuman

TSL 2 BASIC

Gene UBE4A, Length 2,149 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4A-203ENST00000545354 SCCPDHQ8NBX0 429 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 OR4X2Q8NGF9 303 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 OR9G1Q8NH87 305 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 SAP25Q8TEE9 199 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 MRPL24Q96A35 216 aaKnown RBP4.34□□□□□ -1.71
UBE4A-203ENST00000545354 TIMD4Q96H15 378 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 WDYHV1Q96HA8 205 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 ZNF488Q96MN9 340 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 KIR2DL4Q99706 377 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 SFXN3Q9BWM7 321 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 CHST6Q9GZX3 395 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 PBOV1Q9GZY1 135 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 SDF2L1Q9HCN8 221 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 MANBALQ9NQG1 85 aa4.34□□□□□ -1.71
UBE4A-203ENST00000545354 MRPS17Q9Y2R5 130 aaKnown RBP4.34□□□□□ -1.71
UBE4A-203ENST00000545354 MUC21A0A0G2JKD1 596 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 MUC21A0A140T8X8 626 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 TMEM272A0A1B0GTI8 110 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 MEGF11A6BM72 1044 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 H3BMG7 143 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 HGFP14210 728 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 CRISP2P16562 243 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 RPL35AP18077 110 aaKnown RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 BCL3P20749 454 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 GPR183P32249 361 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 CFHR1Q03591 330 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 CD69Q07108 199 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 MUC21Q5SSG8 566 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF648Q5T619 568 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 Q6ZVH6 145 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 BAGE3Q86Y29 109 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 BAGE2Q86Y30 109 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 OR13H1Q8NG92 308 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 NSG2Q9Y328 171 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 COL6A3P12111 3177 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 VWC2LB2RUY7 222 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF736B4DX44 427 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 PTGESO14684 152 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 MSCO60682 206 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 NAPSAO96009 420 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 CT62P0C5K7 136 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 IGLC6P0CF74 106 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 GABRG2P18507 467 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 CD58P19256 250 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 IGFBP6P24592 240 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 LOXP28300 417 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 PCBP3P57721 371 aaKnown RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 PFN3P60673 137 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 SNRPFP62306 86 aaKnown RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 ADORA2A-AS1P86434 159 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 IHHQ14623 411 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 RNPS1Q15287 305 aaKnown RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 GUSBP1Q15486 140 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 LINC00114Q6XXX2 140 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 RFLNAQ6ZTI6 216 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 CBLL1Q75N03 491 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 METTL27Q8N6F8 245 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 ZDHHC19Q8WVZ1 309 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 NEIL2Q969S2 332 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 ADAT3Q96EY9 351 aaPredicted RBP4.33□□□□□ -1.72
UBE4A-203ENST00000545354 SCGB3A2Q96PL1 93 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 MDFIQ99750 246 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 RARRES2Q99969 163 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 NAA60Q9H7X0 242 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 FSCN3Q9NQT6 498 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 TVP23BQ9NYZ1 205 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 INSL5Q9Y5Q6 135 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 FRMPD3Q5JV73 1810 aa4.33□□□□□ -1.72
UBE4A-203ENST00000545354 TIAM2Q8IVF5 1701 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF106Q9H2Y7 1883 aaKnown RBP4.32□□□□□ -1.72
UBE4A-203ENST00000545354 TRAV1-1A0A0B4J248 108 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 TCRBV7S3A2A0A539 114 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 PRSS38A1L453 326 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 H0YL77 283 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 UQCRQO14949 82 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 SOCS1O15524 211 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 APOMO95445 188 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 NTN1O95631 604 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 MT-ND6P03923 174 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 CDAP32320 146 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 ACVRL1P37023 503 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 PSMB3P49720 205 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 HMGA2P52926 109 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 SMIM11AP58511 58 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 RPS14P62263 151 aaKnown RBP4.32□□□□□ -1.72
UBE4A-203ENST00000545354 GNB2P62879 340 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 ZNF85Q03923 595 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 LAMTOR4Q0VGL1 99 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 NKG7Q16617 165 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 C2orf68Q2NKX9 166 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 CMC1Q7Z7K0 106 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 RYBPQ8N488 228 aaPredicted RBP4.32□□□□□ -1.72
UBE4A-203ENST00000545354 GJC3Q8NFK1 279 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 SEC22AQ96IW7 307 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 CDIP1Q9H305 208 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 RHOJQ9H4E5 214 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 HRASLS2Q9NWW9 162 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 KLK11Q9UBX7 282 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 R4GN57 208 aa4.32□□□□□ -1.72
UBE4A-203ENST00000545354 DOCK5Q9H7D0 1870 aa4.32□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms