RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 RPS11P62280 158 aaKnown RBP eCLIP6.92□□□□□ -1.3
CHD4-212ENST00000545083 RBMS2Q15434 407 aaKnown RBP6.92□□□□□ -1.3
CHD4-212ENST00000545083 TNXAQ16473 311 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 C15orf32Q32M92 178 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 ANKRD55Q3KP44 614 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 OR10K2Q6IF99 312 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 GPHB5Q86YW7 130 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 GVQW1Q8N7I0 195 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 STPG3Q8N7X2 389 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 OR52I1Q8NGK6 324 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 OR1L6Q8NGR2 347 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 SETD6Q8TBK2 473 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 C2CD4CQ8TF44 421 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 SRSF12Q8WXF0 261 aaKnown RBP6.92□□□□□ -1.3
CHD4-212ENST00000545083 PTX4Q96A99 478 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 C5orf30Q96GV9 206 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 HARBI1Q96MB7 349 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 PLA2G2EQ9NZK7 142 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 S4R3C0 116 aa6.92□□□□□ -1.3
CHD4-212ENST00000545083 IGKV1-6A0A0C4DH72 117 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 KIR2DL5BA0A0G2JN68 375 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 KIR2DL5BA0A0G2JPC4 375 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 ZNF320A2RRD8 509 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 PRSS29PA6NIE9 313 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 SAC3D1A6NKF1 404 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 MPPED1O15442 326 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 LALBAP00709 142 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 IGHV3-23P01764 117 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 CALRP27797 417 aaKnown RBP6.91□□□□□ -1.3
CHD4-212ENST00000545083 PRSS8Q16651 343 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 CCDC58Q4VC31 144 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 TMEM177Q53S58 311 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 C10orf55Q5SWW7 151 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 OR2G6Q5TZ20 316 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 IDO2Q6ZQW0 420 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 ZNF575Q86XF7 245 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 KIR2DL5AQ8N109 375 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 NECAP1Q8NC96 275 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 KIR2DL5BQ8NHK3 375 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 C11orf45Q8TAV5 145 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 EDARADDQ8WWZ3 215 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 CCDC140Q96MF4 163 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 NEDD4LQ96PU5 975 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 HDHD3Q9BSH5 251 aaPredicted RBP6.91□□□□□ -1.3
CHD4-212ENST00000545083 ZNF221Q9UK13 617 aa6.91□□□□□ -1.3
CHD4-212ENST00000545083 EXOSC1Q9Y3B2 195 aaKnown RBP6.91□□□□□ -1.3
CHD4-212ENST00000545083 LRP1BQ9NZR2 4599 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 TRBV5-7A0A0A0MS05 114 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 SNTNA6NMZ2 147 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 IGLL5B9A064 214 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 SHOXO15266 292 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 OGG1O15527 345 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 IFNA4P05014 189 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 SCTP09683 121 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 HTR2CP28335 458 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 ETV1P50549 477 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 TCTAP57738 103 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 HLA-DRB3P79483 266 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 ODF3L2Q3SX64 289 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 ZIK1Q3SY52 487 aaPredicted RBP6.9□□□□□ -1.3
CHD4-212ENST00000545083 Q499Y3 187 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 CLEC19AQ6UXS0 136 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 UNQ9165/PRO28630Q6UXU0 137 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 TTC9CQ8N5M4 171 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 OR2C3Q8N628 320 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 SLC7A6OSQ96CW6 309 aaPredicted RBP6.9□□□□□ -1.3
CHD4-212ENST00000545083 SMIM19Q96E16 107 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 NICN1Q9BSH3 213 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 MAP6D1Q9H9H5 199 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 CHMP1AQ9HD42 196 aaPredicted RBP6.9□□□□□ -1.3
CHD4-212ENST00000545083 CKLFQ9UBR5 152 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 FBXL7Q9UJT9 491 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 AP4S1Q9Y587 144 aa6.9□□□□□ -1.3
CHD4-212ENST00000545083 TRAV25A0A0B4J276 109 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 DEFB4AO15263 64 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 GYG2O15488 501 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 ALPLP05186 524 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 C8orf88P0DMB2 117 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 ZBTB25P24278 435 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 ARL3P36405 182 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 MFAP2P55001 183 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 RBPMS2Q6ZRY4 209 aaKnown RBP6.89□□□□□ -1.31
CHD4-212ENST00000545083 MOB1BQ7L9L4 216 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 CDH26Q8IXH8 852 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 ZFP41Q8N8Y5 198 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 TEX45Q8NA69 505 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 ACOT12Q8WYK0 555 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 PGLYRP3Q96LB9 341 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 RARRES2Q99969 163 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 MFFQ9GZY8 342 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 C11orf68Q9H3H3 251 aaKnown RBP6.89□□□□□ -1.31
CHD4-212ENST00000545083 KCNK15Q9H427 330 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 ZNF430Q9H8G1 570 aaPredicted RBP6.89□□□□□ -1.31
CHD4-212ENST00000545083 MRPS18AQ9NVS2 196 aaKnown RBP6.89□□□□□ -1.31
CHD4-212ENST00000545083 SDHAF2Q9NX18 166 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 RDH8Q9NYR8 311 aa6.89□□□□□ -1.31
CHD4-212ENST00000545083 APOBP04114 4563 aaKnown RBP6.88□□□□□ -1.31
CHD4-212ENST00000545083 A0A0A6YYD4 124 aa6.88□□□□□ -1.31
CHD4-212ENST00000545083 TRBV6-6A0A0A6YYG2 114 aa6.88□□□□□ -1.31
CHD4-212ENST00000545083 HMX3A6NHT5 357 aa6.88□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms