RNA–Protein interactions for RNA: ENST00000544585.5

CPSF7-222, Transcript of cleavage and polyadenylation specific factor 7, human

TSL 2

Gene CPSF7, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CPSF7-222	ENST00000544585	UBE2E2	Q96LR5	201 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	YIPF3	Q9GZM5	350 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	ABCG5	Q9H222	651 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	ADGRL4	Q9HBW9	690 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	FAM206A	Q9NX38	181 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	NUFIP1	Q9UHK0	495 aa	Known RBP	4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	MGAT4A	Q9UM21	535 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	EXOG	Q9Y2C4	368 aa	Known RBP	4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	TMEM14A	Q9Y6G1	99 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585		V9GYS6	101 aa		4.62	□□□□□ -1.67
CPSF7-222	ENST00000544585	KIAA2026	Q5HYC2	2103 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	IGHV3-38	A0A0C4DH36	116 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	RBMY1B	A6NDE4	496 aa	Known RBP	4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	RBMY1E	A6NEQ0	496 aa	Known RBP	4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	FAM183A	A6NL82	134 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF729	A6NN14	1252 aa	Predicted RBP	4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	OVOL1	O14753	267 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	CCDC22	O60826	627 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	CCNB2	O95067	398 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	CYB5A	P00167	134 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	IGHG4	P01861	327 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	TTR	P02766	147 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	IGF1	P05019	195 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	HCK	P08631	526 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	RBMY1D	P0C7P1	496 aa	Known RBP	4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	HSD17B1	P14061	328 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	VDAC1	P21796	283 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	POU3F4	P49335	361 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	RIDA	P52758	137 aa	Known RBP	4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	PSME3	P61289	254 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	GNB1	P62873	340 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF616	Q08AN1	781 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	MADCAM1	Q13477	382 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	MICA	Q29983	383 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	DEFB136	Q30KP8	78 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	SPIN3	Q5JUX0	258 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	PRAMEF5	Q5TYX0	476 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585		Q6ZSR3	168 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	TGIF2LX	Q8IUE1	241 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	FAM58A	Q8N1B3	248 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	CCDC54	Q8NEL0	328 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR1B1	Q8NGR6	318 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR2T10	Q8NGZ9	312 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR56B4	Q8NH76	319 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	CNIH3	Q8TBE1	160 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	TEX47	Q8TBZ9	253 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	ASB17	Q8WXJ9	295 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	TOMM40L	Q969M1	308 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	BORCS8	Q96FH0	119 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	RASL11B	Q9BPW5	248 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	ST6GALNAC5	Q9BVH7	336 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	CHST6	Q9GZX3	395 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	NCOR1P1	Q9H4R4	102 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	MOB1A	Q9H8S9	216 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF286A	Q9HBT8	521 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	ABCD2	Q9UBJ2	740 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	VSIG4	Q9Y279	399 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	FBXO7	Q9Y3I1	522 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	LRRC42	Q9Y546	428 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	DNAH1	Q9P2D7	4330 aa		4.61	□□□□□ -1.67
CPSF7-222	ENST00000544585	KBTBD11-OT1	A0A1B0GTJ5	212 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585		I3L521	148 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	IGKV1D-33	P01593	117 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	IGKV1-33	P01594	117 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	GAPDH	P04406	335 aa	Known RBP	4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	RPSA	P08865	295 aa	Known RBP	4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF735	P0CB33	412 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	HSMCR30	P0CW71	290 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	SPN	P16150	400 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	NFYB	P25208	207 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	PSMB8	P28062	276 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	ATP1B3	P54709	279 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF85	Q03923	595 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	AES	Q08117	197 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	RCN1	Q15293	331 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	BAIAP2L2	Q6UXY1	529 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	SLC25A26	Q70HW3	274 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	CEACAM19	Q7Z692	300 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	LYPD6	Q86Y78	171 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	SGPP2	Q8IWX5	399 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	PGAM4	Q8N0Y7	254 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF491	Q8N8L2	437 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	AQP11	Q8NBQ7	271 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR10A7	Q8NGE5	316 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	DCUN1D4	Q92564	292 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR4C12	Q96R67	309 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	OR51J1	Q9H342	316 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	RHOF	Q9HBH0	211 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	ARMC1	Q9NVT9	282 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	NDE1	Q9NXR1	346 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	ZNF580	Q9UK33	172 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	DSCAML1	Q8TD84	2053 aa		4.6	□□□□□ -1.67
CPSF7-222	ENST00000544585	HUWE1	Q7Z6Z7	4374 aa	Known RBP	4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	TRBV7-9	A0A0J9YWB2	115 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585		A0A1B0GTI1	187 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	ODAM	A1E959	279 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585		A6NIN4	97 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585	LOC110117498-PIK3R3	F6TDL0	507 aa		4.59	□□□□□ -1.67
CPSF7-222	ENST00000544585		H3BN98	237 aa		4.59	□□□□□ -1.67

Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms