RNA–Protein interactions for RNA: ENST00000544584.1

CLSTN3-215, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-215ENST00000544584 SCPEP1Q9HB40 452 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 SDHAF2Q9NX18 166 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 OR1A1Q9P1Q5 309 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 ZNF230Q9UIE0 474 aaPredicted RBP4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 LINC00527Q9UJ94 153 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 KCNK7Q9Y2U2 307 aa4.41□□□□□ -1.7
CLSTN3-215ENST00000544584 IGHV7-81A0A0B4J1V7 117 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 A0A0B4J203 849 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 PIGBOS1A0A0B4J2F0 54 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 A0A1W2PN81 502 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 FAM25AB3EWG3 89 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 FAM25CB3EWG5 89 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 FAM25GB3EWG6 89 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 ZNF736B4DX44 427 aaPredicted RBP4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 LINC01619G3V211 115 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 SULT1C2O00338 296 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 ATP6V0E1O15342 81 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 SLC25A17O43808 307 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 FCGR3BO75015 233 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 ATG12O94817 140 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 CRYZL1O95825 349 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 HLA-DQB1P01920 261 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 APOA1P02647 267 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 IGKV1-16P04430 117 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 IFNA6P05013 189 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 RPLP1P05386 114 aaKnown RBP4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 TBPP20226 339 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 PSMB8P28062 276 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 FCGR2CP31995 323 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 DUTP33316 252 aaKnown RBP4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 CHRNA7P36544 502 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 DGCR2P98153 550 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 RUNX1Q01196 453 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 CDK10Q15131 360 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 TMEM177Q53S58 311 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 UTF1Q5T230 341 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 KPRPQ5T749 579 aaPredicted RBP4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 GLDNQ6ZMI3 551 aaPredicted RBP4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 C8orf86Q6ZUL3 223 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 KCTD9Q7L273 389 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 HSD17B13Q7Z5P4 300 aaPredicted RBP4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 ZNF383Q8NA42 475 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 DRAXINQ8NBI3 349 aaPredicted RBP4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 OR11H1Q8NG94 326 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 OR1N2Q8NGR9 330 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 OR5H2Q8NGV7 314 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 GRPEL2Q8TAA5 225 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 MRAPQ8TCY5 172 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 NUDCD2Q8WVJ2 157 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 SECTM1Q8WVN6 248 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 GIMAP1Q8WWP7 306 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 MAFIPQ8WZ33 124 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 CLCC1Q96S66 551 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 BCL7BQ9BQE9 202 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 HSPB9Q9BQS6 159 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 RANGRFQ9HD47 186 aaPredicted RBP4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 THYN1Q9P016 225 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 RBMX2Q9Y388 322 aaKnown RBP4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 NUBP2Q9Y5Y2 271 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 WSB1Q9Y6I7 421 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 A3GALT2U3KPV4 340 aa4.4□□□□□ -1.71
CLSTN3-215ENST00000544584 IGKV1-6A0A0C4DH72 117 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 SHISA3A0PJX4 238 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 SMIM30A4D0T7 59 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 FAM223BA6NKX1 122 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 G3V4G9 280 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 RBFOX2O43251 390 aaKnown RBP eCLIP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 OR2A4O95047 310 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 BRI3O95415 125 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 HPRT1P00492 218 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 CA2P00918 260 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 PPYP01298 95 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 IGLV1-40P01703 118 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 TRGV3P03979 118 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 HSPB1P04792 205 aaKnown RBP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 FGF2P09038 288 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 LGALS1P09382 135 aaKnown RBP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 IGLL1P15814 213 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 NQO2P16083 231 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 HIST1H1BP16401 226 aaKnown RBP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 ZNF182P17025 639 aaPredicted RBP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 NFYAP23511 347 aaPredicted RBP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 RCVRNP35243 200 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 RPS19P39019 145 aaKnown RBP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 ECI1P42126 302 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 TPPP2P59282 170 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 TAS2R31P59538 309 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 LSM3P62310 102 aaKnown RBP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 MRPS10P82664 201 aaKnown RBP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 TNXAQ16473 311 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 BEAN1Q3B7T3 259 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 OXLD1Q5BKU9 147 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 DEFB121Q5J5C9 76 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 TCTEX1D4Q5JR98 221 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 VAX1Q5SQQ9 334 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 THOC7Q6I9Y2 204 aaKnown RBP4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 OVCH2Q7RTZ1 564 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 NR2C2APQ86WQ0 139 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 ANKRD13BQ86YJ7 626 aa4.39□□□□□ -1.71
CLSTN3-215ENST00000544584 FAM223AQ8IWN6 122 aa4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms