RNA–Protein interactions for RNA: ENST00000544278.2

SNRNP70-203, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 3,221 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-203ENST00000544278 SCGB1C1Q8TD33 95 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 RAB39BQ96DA2 213 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF71Q9NQZ8 489 aaPredicted RBP13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 PROCRQ9UNN8 238 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 WNK2Q9Y3S1 2297 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 TMEM30CPA0ZSE6 113 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 ODAMA1E959 279 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST1H2BKO60814 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 SCAF4O95104 1147 aaKnown RBP13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 IGKV1D-33P01593 117 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 IGKV1-33P01594 117 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST1H2BJP06899 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST1H2BOP23527 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST1H2BBP33778 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 TAGLN2P37802 199 aaKnown RBP13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST1H2BDP58876 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST1H2BCP62807 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF146Q15072 292 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST2H2BEQ16778 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 GCSAMLQ5JQS6 135 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 NCR3LG1Q68D85 454 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST1H2BHQ93079 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST1H2BNQ99877 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 HIST1H2BMQ99879 126 aa13.18□□□□□ -0.3
SNRNP70-203ENST00000544278 FCGR3BO75015 233 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 MMP9P14780 707 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 UBE2KP61086 200 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 PKIAP61925 76 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 TFF3Q07654 80 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 ICAM4Q14773 271 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 INO80CQ6PI98 192 aaPredicted RBP13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF474Q6S9Z5 364 aaPredicted RBP13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 SARAFQ96BY9 339 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 SNX22Q96L94 193 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 TUBA4BQ9H853 241 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 PIP4P1Q86T03 277 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 OR2V2Q96R30 315 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 TMEM204Q9BSN7 226 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 PBDC1Q9BVG4 233 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 NAV3Q8IVL0 2385 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 SMCO3A2RU48 225 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 CEBPZOSA8MTT3 80 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 NUDT19A8MXV4 375 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 IGKV3-15P01624 115 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 TAS2R30P59541 319 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF718Q3SXZ3 478 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 BHLHA15Q7RTS1 189 aaPredicted RBP13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF525Q8N782 197 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 HINT2Q9BX68 163 aa13.17□□□□□ -0.3
SNRNP70-203ENST00000544278 TRAV3A0A0B4J244 114 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 SDSLQ96GA7 329 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 NEU1Q99519 415 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 STRAPQ9Y3F4 350 aaKnown RBP13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 SLC38A11Q08AI6 406 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF787Q6DD87 383 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 HEPN1Q6WQI6 88 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 ZNF429Q86V71 674 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 NECAP1Q8NC96 275 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 Q8WTZ3 238 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 ITLN1Q8WWA0 313 aa13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 PACRGQ96M98 296 aaPredicted RBP13.16□□□□□ -0.3
SNRNP70-203ENST00000544278 A0A1B0GU03 582 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 A0A1B0GWJ7 208 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 PRR33A8MZF0 331 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 GALR2O43603 387 aaPredicted RBP13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 PROP1O75360 226 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 IGHG3P01860 377 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 SRP19P09132 144 aaKnown RBP13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 PRDX2P32119 198 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 GNG10P50151 68 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 DLK1P80370 383 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 HMGN3Q15651 99 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 C1orf229Q6ZS94 237 aaPredicted RBP13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 LIN7CQ9NUP9 197 aaKnown RBP13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 IGKV1D-17A0A075B6S4 117 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 CYB5R3P00387 301 aaPredicted RBP13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 CXXC4Q9H2H0 198 aa13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 MBNL3Q9NUK0 354 aaKnown RBP13.15□□□□□ -0.3
SNRNP70-203ENST00000544278 A6NNC1 897 aa13.15□□□□□ -0.31
SNRNP70-203ENST00000544278 ZNF134P52741 427 aa13.15□□□□□ -0.31
SNRNP70-203ENST00000544278 RCC1LQ96I51 464 aaKnown RBP13.15□□□□□ -0.31
SNRNP70-203ENST00000544278 MRPL37Q9BZE1 423 aaKnown RBP13.15□□□□□ -0.31
SNRNP70-203ENST00000544278 ANKHD1Q8IWZ3 2542 aaKnown RBP13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 M0R1X1 148 aa13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 BAXQ07812 192 aa13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 WFIKKN1Q96NZ8 548 aa13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 SIRT7Q9NRC8 400 aa13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 RPP30P78346 268 aaKnown RBP13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 TNFRSF9Q07011 255 aa13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 RPUSD4Q96CM3 377 aaKnown RBP13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 QTRT1Q9BXR0 403 aaKnown RBP13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 FAM215AQ9Y5M1 114 aa13.14□□□□□ -0.31
SNRNP70-203ENST00000544278 SEC14L6B5MCN3 397 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 CCL8P80075 99 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 ACSM6Q6P461 480 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 GCSAMQ8N6F7 178 aa13.13□□□□□ -0.31
SNRNP70-203ENST00000544278 CLDND2Q8NHS1 167 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms