RNA–Protein interactions for RNA: ENST00000543928.5

SP140-213, Transcript of SP140 nuclear body protein, humanhuman

TSL 2

Gene SP140, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-213ENST00000543928 PRELID3BQ9Y3B1 194 aa10.85□□□□□ -0.67
SP140-213ENST00000543928 LINC00854A0A1B0GVQ3 168 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 SH2D7A6NKC9 451 aaPredicted RBP10.84□□□□□ -0.67
SP140-213ENST00000543928 NBR2O15453 112 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 FGF16O43320 207 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 PGLYRP1O75594 196 aaPredicted RBP10.84□□□□□ -0.67
SP140-213ENST00000543928 TSPAN9O75954 239 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 CRYZL1O95825 349 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 RLN1P04808 185 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 PI3P19957 117 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 CD40LGP29965 261 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 RPS16P62249 146 aaKnown RBP10.84□□□□□ -0.67
SP140-213ENST00000543928 CATR1Q13166 79 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 ZNF846Q147U1 533 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 ABCA11PQ4W5N1 156 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 C11orf88Q6PI97 169 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 Q6ZS46 218 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 C5orf56Q8N8D9 126 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 Q8N9W7 124 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 NPBQ8NG41 125 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 OR13C8Q8NGS7 320 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 OR51H1Q8NH63 302 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 RNF5Q99942 180 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 CCDC32Q9BV29 185 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 PRSS22Q9GZN4 317 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 ZNF702PQ9H963 129 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 COL6A5A8TX70 2615 aa10.84□□□□□ -0.67
SP140-213ENST00000543928 TMEM89A2RUT3 159 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 SHOXO15266 292 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 S100GP29377 79 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 ECI1P42126 302 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 KIR2DS2P43631 304 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 BRWD1-AS2P59051 145 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 KRTAP21-3Q3LHN1 58 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 TMEM177Q53S58 311 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 C9orf152Q5JTZ5 239 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 FAM71E2Q8N5Q1 922 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 OR4F5Q8NH21 305 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 OR4S2Q8NH73 311 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 ZFAND1Q8TCF1 268 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 ZNF486Q96H40 463 aaPredicted RBP10.83□□□□□ -0.68
SP140-213ENST00000543928 HARBI1Q96MB7 349 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 TSNAXQ99598 290 aaKnown RBP10.83□□□□□ -0.68
SP140-213ENST00000543928 SLC2A9Q9NRM0 540 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 KIAA1456Q9P272 454 aa10.83□□□□□ -0.68
SP140-213ENST00000543928 NDUFA3O95167 84 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 CTSDP07339 412 aaPredicted RBP10.82□□□□□ -0.68
SP140-213ENST00000543928 MDKP21741 143 aaPredicted RBP10.82□□□□□ -0.68
SP140-213ENST00000543928 PIGPP57054 158 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 FOXL1Q12952 345 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 SURF2Q15527 256 aaPredicted RBP10.82□□□□□ -0.68
SP140-213ENST00000543928 ARSJQ5FYB0 599 aaPredicted RBP10.82□□□□□ -0.68
SP140-213ENST00000543928 TBC1D26Q86UD7 250 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 SPAG16Q8N0X2 631 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 Q8N2B8 174 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 POC5Q8NA72 575 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 MDFIQ99750 246 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 RASL11BQ9BPW5 248 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 FBXL15Q9H469 300 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 C16orf95Q9H693 158 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 LIN7CQ9NUP9 197 aaKnown RBP10.82□□□□□ -0.68
SP140-213ENST00000543928 SIGLEC9Q9Y336 463 aa10.82□□□□□ -0.68
SP140-213ENST00000543928 NAP1L6A6NFF2 107 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 SRRM4A7MD48 611 aaKnown RBP10.81□□□□□ -0.68
SP140-213ENST00000543928 RRHO14718 337 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 RAMP3O60896 148 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 SPDEFO95238 335 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 IGLV2-23P01705 113 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 LGALS7P47929 136 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 RND3P61587 244 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 PLGLAQ15195 96 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 PSG5Q15238 335 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 C5orf64Q2M2E5 130 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 OR2T6Q8NHC8 308 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 LINC01006Q8NI28 216 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 OSR1Q8TAX0 266 aaPredicted RBP10.81□□□□□ -0.68
SP140-213ENST00000543928 SCGB3A2Q96PL1 93 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 C7orf50Q9BRJ6 194 aaKnown RBP10.81□□□□□ -0.68
SP140-213ENST00000543928 C5orf66Q9H5L9 145 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 BEX1Q9HBH7 125 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 COPZ2Q9P299 210 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 METTL1Q9UBP6 276 aaKnown RBP10.81□□□□□ -0.68
SP140-213ENST00000543928 GPR132Q9UNW8 380 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 C14orf166Q9Y224 244 aaKnown RBP10.81□□□□□ -0.68
SP140-213ENST00000543928 VSIG4Q9Y279 399 aa10.81□□□□□ -0.68
SP140-213ENST00000543928 CLPSL1A2RUU4 121 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 CENPXA8MT69 81 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 MPPED1O15442 326 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 RBFOX2O43251 390 aaKnown RBP eCLIP10.8□□□□□ -0.68
SP140-213ENST00000543928 SLC25A17O43808 307 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 VSIG10L2P0DP72 767 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 F2RP25116 425 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 TMEM95Q3KNT9 176 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 AWAT1Q58HT5 328 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 LIN54Q6MZP7 749 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 CCDC71LQ8N9Z2 235 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 CD300LFQ8TDQ1 290 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 RTBDNQ9BSG5 229 aaPredicted RBP10.8□□□□□ -0.68
SP140-213ENST00000543928 MMP24Q9Y5R2 645 aa10.8□□□□□ -0.68
SP140-213ENST00000543928 A0A1B0GUS0 222 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms