RNA–Protein interactions for RNA: ENST00000543789.6

CDKN3-207, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-207ENST00000543789 FAM110AQ9BQ89 295 aa17.13■□□□□ 0.33
CDKN3-207ENST00000543789 AK6Q9Y3D8 172 aaKnown RBP17.13■□□□□ 0.33
CDKN3-207ENST00000543789 TNCP24821 2201 aa17.13■□□□□ 0.33
CDKN3-207ENST00000543789 PTGES3LE9PB15 166 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 BET1O15155 118 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 OR9G9P0C7N8 305 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 RRASP10301 218 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 CD300EQ496F6 205 aaPredicted RBP17.12■□□□□ 0.33
CDKN3-207ENST00000543789 LAX1Q8IWV1 398 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 TEX45Q8NA69 505 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 OR56B1Q8NGI3 324 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 OR10J5Q8NHC4 309 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 NEURL2Q9BR09 285 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 SLC2A8Q9NY64 477 aa17.12■□□□□ 0.33
CDKN3-207ENST00000543789 LSM2Q9Y333 95 aaKnown RBP17.12■□□□□ 0.33
CDKN3-207ENST00000543789 MRPS15P82914 257 aaKnown RBP17.11■□□□□ 0.33
CDKN3-207ENST00000543789 RHOGP84095 191 aa17.11■□□□□ 0.33
CDKN3-207ENST00000543789 ATP5G2Q06055 141 aa17.11■□□□□ 0.33
CDKN3-207ENST00000543789 MED22Q15528 200 aa17.11■□□□□ 0.33
CDKN3-207ENST00000543789 PRSS8Q16651 343 aa17.11■□□□□ 0.33
CDKN3-207ENST00000543789 VMA21Q3ZAQ7 101 aa17.11■□□□□ 0.33
CDKN3-207ENST00000543789 IGSF11Q5DX21 431 aa17.11■□□□□ 0.33
CDKN3-207ENST00000543789 LIPKQ5VXJ0 399 aa17.11■□□□□ 0.33
CDKN3-207ENST00000543789 UFD1Q92890 307 aa17.11■□□□□ 0.33
CDKN3-207ENST00000543789 AKIP1Q9NQ31 210 aa17.11■□□□□ 0.33
CDKN3-207ENST00000543789 FAM223BA6NKX1 122 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 ZNF785A8K8V0 405 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 BMPR1BO00238 502 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 MPPED1O15442 326 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 GSTT2P0CG29 244 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 GSTT2BP0CG30 244 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 CLDN12P56749 244 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 UBE2KP61086 200 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 TNXAQ16473 311 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 C2orf76Q3KRA6 126 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 TMEM91Q6ZNR0 172 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 FAM223AQ8IWN6 122 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 FAM3DQ96BQ1 224 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 C5orf30Q96GV9 206 aa17.1■□□□□ 0.33
CDKN3-207ENST00000543789 ZNF230Q9UIE0 474 aaPredicted RBP17.1■□□□□ 0.33
CDKN3-207ENST00000543789 RBM7Q9Y580 266 aaKnown RBP17.1■□□□□ 0.33
CDKN3-207ENST00000543789 TRBV6-7A0A0A0MS04 114 aa17.09■□□□□ 0.33
CDKN3-207ENST00000543789 RBMY1BA6NDE4 496 aaKnown RBP17.09■□□□□ 0.33
CDKN3-207ENST00000543789 RBMY1EA6NEQ0 496 aaKnown RBP17.09■□□□□ 0.33
CDKN3-207ENST00000543789 DENRO43583 198 aaKnown RBP17.09■□□□□ 0.33
CDKN3-207ENST00000543789 CD7P09564 240 aa17.09■□□□□ 0.33
CDKN3-207ENST00000543789 RBMY1DP0C7P1 496 aaKnown RBP17.09■□□□□ 0.33
CDKN3-207ENST00000543789 RANBP1P43487 201 aa17.09■□□□□ 0.33
CDKN3-207ENST00000543789 TPBGQ13641 420 aa17.09■□□□□ 0.33
CDKN3-207ENST00000543789 DEFB125Q8N687 156 aa17.09■□□□□ 0.33
CDKN3-207ENST00000543789 SRSF12Q8WXF0 261 aaKnown RBP17.09■□□□□ 0.33
CDKN3-207ENST00000543789 CABLES2Q9BTV7 478 aa17.09■□□□□ 0.33
CDKN3-207ENST00000543789 KCNK7Q9Y2U2 307 aa17.09■□□□□ 0.33
CDKN3-207ENST00000543789 ARL6IP5O75915 188 aa17.08■□□□□ 0.32
CDKN3-207ENST00000543789 DIRAS3O95661 229 aa17.08■□□□□ 0.32
CDKN3-207ENST00000543789 PRH1P02810 166 aa17.08■□□□□ 0.32
CDKN3-207ENST00000543789 EXOSC2Q13868 293 aaKnown RBP17.08■□□□□ 0.32
CDKN3-207ENST00000543789 DEFB114Q30KQ6 69 aa17.08■□□□□ 0.32
CDKN3-207ENST00000543789 IDO2Q6ZQW0 420 aa17.08■□□□□ 0.32
CDKN3-207ENST00000543789 DYNLRB2Q8TF09 96 aa17.08■□□□□ 0.32
CDKN3-207ENST00000543789 ADTRPQ96IZ2 230 aa17.08■□□□□ 0.32
CDKN3-207ENST00000543789 HYDINQ4G0P3 5121 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP17.07■□□□□ 0.32
CDKN3-207ENST00000543789 TRBV9A0A0B4J1U6 114 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 OR11H12B2RN74 326 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 EBAG9O00559 213 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 TUSC2O75896 110 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 CRYZL1O95825 349 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 FCGR3AP08637 254 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 ZNF45Q02386 682 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 ACOT12Q8WYK0 555 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 DDB2Q92466 427 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 KCTD12Q96CX2 325 aaKnown RBP17.07■□□□□ 0.32
CDKN3-207ENST00000543789 RAB3CQ96E17 227 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 RAB22AQ9UL26 194 aa17.07■□□□□ 0.32
CDKN3-207ENST00000543789 ACTL6BO94805 426 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 DUTP33316 252 aaKnown RBP17.06■□□□□ 0.32
CDKN3-207ENST00000543789 KIR2DS2P43631 304 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 RCN1Q15293 331 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 TRAM1Q15629 374 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 GUCA2BQ16661 112 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 NECAP1Q8NC96 275 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 OSR1Q8TAX0 266 aaPredicted RBP17.06■□□□□ 0.32
CDKN3-207ENST00000543789 SPIN2AQ99865 258 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 SPIN2BQ9BPZ2 258 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 GINS4Q9BRT9 223 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 SRD5A3Q9H8P0 318 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 SCN3BQ9NY72 215 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 V9GY05 133 aa17.06■□□□□ 0.32
CDKN3-207ENST00000543789 TMEM272A0A1B0GTI8 110 aa17.05■□□□□ 0.32
CDKN3-207ENST00000543789 HSMCR30P0CW71 290 aa17.05■□□□□ 0.32
CDKN3-207ENST00000543789 PSMD7P51665 324 aa17.05■□□□□ 0.32
CDKN3-207ENST00000543789 RPS25P62851 125 aaKnown RBP17.05■□□□□ 0.32
CDKN3-207ENST00000543789 PLA2G7Q13093 441 aa17.05■□□□□ 0.32
CDKN3-207ENST00000543789 IRF3Q14653 427 aa17.05■□□□□ 0.32
CDKN3-207ENST00000543789 FAM209BQ5JX69 171 aa17.05■□□□□ 0.32
CDKN3-207ENST00000543789 OGFRL1Q5TC84 451 aaPredicted RBP17.05■□□□□ 0.32
CDKN3-207ENST00000543789 TTC9CQ8N5M4 171 aa17.05■□□□□ 0.32
CDKN3-207ENST00000543789 ZNF430Q9H8G1 570 aaPredicted RBP17.05■□□□□ 0.32
CDKN3-207ENST00000543789 CREBL2O60519 120 aaPredicted RBP17.04■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms