RNA–Protein interactions for RNA: ENST00000543093.1

CSF1R-209, Transcript of colony stimulating factor 1 receptor, humanhuman

TSL 1 (best) BASIC

Gene CSF1R, Length 921 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSF1R-209ENST00000543093 CASTOR1Q8WTX7 329 aa11.97□□□□□ -0.49
CSF1R-209ENST00000543093 FLYWCH2Q96CP2 140 aaKnown RBP11.97□□□□□ -0.49
CSF1R-209ENST00000543093 SLC25A38Q96DW6 304 aa11.97□□□□□ -0.49
CSF1R-209ENST00000543093 FBXO7Q9Y3I1 522 aa11.97□□□□□ -0.49
CSF1R-209ENST00000543093 HUWE1Q7Z6Z7 4374 aaKnown RBP11.97□□□□□ -0.49
CSF1R-209ENST00000543093 LINC01619G3V211 115 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 SOX15O60248 233 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 CA2P00918 260 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 CTXN2P0C2S0 81 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 CRIP2P52943 208 aaPredicted RBP11.96□□□□□ -0.49
CSF1R-209ENST00000543093 LINC00205P59089 165 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 TAGLNQ01995 201 aaKnown RBP11.96□□□□□ -0.49
CSF1R-209ENST00000543093 RTL8BQ17RB0 113 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 C19orf54Q5BKX5 351 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 TCTEX1D1Q8N7M0 179 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 YIPF6Q96EC8 236 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 C5orf30Q96GV9 206 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 HARBI1Q96MB7 349 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 A3GALT2U3KPV4 340 aa11.96□□□□□ -0.49
CSF1R-209ENST00000543093 IGHV4OR15-8A0A075B7B6 117 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 A0A087WW49 117 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 A0A0A6YYH2 397 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 A6NJ64 397 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 TRIM64CA6NLI5 447 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 SLC25A17O43808 307 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 LGALS1P09382 135 aaKnown RBP11.95□□□□□ -0.5
CSF1R-209ENST00000543093 LYL1P12980 280 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 TGFBR1P36897 503 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 CX3CL1P78423 397 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 CNIH2Q6PI25 160 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 OR6Q1Q8NGQ2 317 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 ARPC1AQ92747 370 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 ADTRPQ96IZ2 230 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 CLCC1Q96S66 551 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 ZMAT4Q9H898 229 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 PALMDQ9NP74 551 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 SPATA2Q9UM82 520 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 FOXA2Q9Y261 457 aaPredicted RBP11.95□□□□□ -0.5
CSF1R-209ENST00000543093 TENM2Q9NT68 2774 aa11.95□□□□□ -0.5
CSF1R-209ENST00000543093 DYNC2H1Q8NCM8 4307 aaKnown RBP11.94□□□□□ -0.5
CSF1R-209ENST00000543093 TRAV18A0A075B6X5 111 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 SSX5O60225 188 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 RRASP10301 218 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 LSM3P62310 102 aaKnown RBP11.94□□□□□ -0.5
CSF1R-209ENST00000543093 TMEM267Q0VDI3 215 aaPredicted RBP11.94□□□□□ -0.5
CSF1R-209ENST00000543093 ACSM6Q6P461 480 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 PPP1R27Q86WC6 154 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 ZNF645Q8N7E2 425 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 BVESQ8NE79 360 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 DIABLOQ9NR28 239 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 TPSG1Q9NRR2 321 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 GAR1Q9NY12 217 aaKnown RBP11.94□□□□□ -0.5
CSF1R-209ENST00000543093 ANXA10Q9UJ72 324 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 OR2W1Q9Y3N9 320 aa11.94□□□□□ -0.5
CSF1R-209ENST00000543093 FCN1O00602 326 aa11.93□□□□□ -0.5
CSF1R-209ENST00000543093 SHOXO15266 292 aa11.93□□□□□ -0.5
CSF1R-209ENST00000543093 IGHV3-11P01762 117 aa11.93□□□□□ -0.5
CSF1R-209ENST00000543093 NFYAP23511 347 aaPredicted RBP11.93□□□□□ -0.5
CSF1R-209ENST00000543093 DUTP33316 252 aaKnown RBP11.93□□□□□ -0.5
CSF1R-209ENST00000543093 LGALS7P47929 136 aa11.93□□□□□ -0.5
CSF1R-209ENST00000543093 ARPC4P59998 168 aa11.93□□□□□ -0.5
CSF1R-209ENST00000543093 TMEM177Q53S58 311 aa11.93□□□□□ -0.5
CSF1R-209ENST00000543093 PYHIN1Q6K0P9 492 aa11.93□□□□□ -0.5
CSF1R-209ENST00000543093 UNQ5815/PRO19632Q6UWF5 114 aa11.93□□□□□ -0.5
CSF1R-209ENST00000543093 ZNF562Q6V9R5 426 aa11.93□□□□□ -0.5
CSF1R-209ENST00000543093 FAM103A1Q9BTL3 118 aaKnown RBP11.93□□□□□ -0.5
CSF1R-209ENST00000543093 J3QRK9 145 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 SLC22A5O76082 557 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 IGLV2-23P01705 113 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 EGR2P11161 476 aaPredicted RBP11.92□□□□□ -0.5
CSF1R-209ENST00000543093 ACTBL2Q562R1 376 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 UBE2NLQ5JXB2 153 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 HAPLN4Q86UW8 402 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 BEST4Q8NFU0 473 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 GRPEL2Q8TAA5 225 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 DDB2Q92466 427 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 MS4A10Q96PG2 267 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 OR4C12Q96R67 309 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 NUBP2Q9Y5Y2 271 aa11.92□□□□□ -0.5
CSF1R-209ENST00000543093 LCE6AA0A183 80 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 LINC00473A8K010 186 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 CNIH1O95406 144 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 CRYZL1O95825 349 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 HLA-DQB1P01920 261 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 HSPB1P04792 205 aaKnown RBP11.91□□□□□ -0.5
CSF1R-209ENST00000543093 CD40LGP29965 261 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 RPS19P39019 145 aaKnown RBP11.91□□□□□ -0.5
CSF1R-209ENST00000543093 TPPP2P59282 170 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 FXYD3Q14802 87 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 VMA21Q3ZAQ7 101 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 AKIRIN2Q53H80 203 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 ZFAND6Q6FIF0 208 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 KCTD9Q7L273 389 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 LFNGQ8NES3 379 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 CITED4Q96RK1 184 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 AUNIPQ9H7T9 357 aa11.91□□□□□ -0.5
CSF1R-209ENST00000543093 MRPS7Q9Y2R9 242 aaKnown RBP11.91□□□□□ -0.5
CSF1R-209ENST00000543093 TUSC2O75896 110 aa11.9□□□□□ -0.5
CSF1R-209ENST00000543093 CBX5P45973 191 aa11.9□□□□□ -0.5
CSF1R-209ENST00000543093 HOGA1Q86XE5 327 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms