RNA–Protein interactions for RNA: ENST00000543048.5

TNFRSF1A-214, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 5

Gene TNFRSF1A, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-214ENST00000543048 TMEM65Q6PI78 240 aa7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 REC114Q7Z4M0 266 aa7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 MRPL41Q8IXM3 137 aaKnown RBP7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 LINC00482Q8N8I6 264 aa7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 ZNF383Q8NA42 475 aa7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 FLYWCH2Q96CP2 140 aaKnown RBP7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 RCC1LQ96I51 464 aaKnown RBP7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 TSNAXQ99598 290 aaKnown RBP7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 FBXL15Q9H469 300 aa7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 SDHAF2Q9NX18 166 aa7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 RABL2AQ9UBK7 228 aaPredicted RBP7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 RABL2BQ9UNT1 228 aa7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 RBM7Q9Y580 266 aaKnown RBP7.62□□□□□ -1.19
TNFRSF1A-214ENST00000543048 TRAV18A0A075B6X5 111 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 IGKV1D-8A0A087WSZ0 117 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 A0A0A6YYH2 397 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 TRAV41A0A0B4J266 112 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 TMEM235A6NFC5 223 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 FABP12A6NFH5 140 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 A6NJ64 397 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 G3V318 75 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 CCL24O00175 119 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 FCN1O00602 326 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 ATP6V0E1O15342 81 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 DUS4LO95620 317 aaKnown RBP7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PTBP1P26599 531 aaKnown RBP eCLIP7.61□□□□□ -1.191e-7■■■□□ 14.7
TNFRSF1A-214ENST00000543048 PSMB8P28062 276 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 CD40LGP29965 261 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PPIFP30405 207 aaKnown RBP7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 LGALS7P47929 136 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 GNG2P59768 71 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 CX3CL1P78423 397 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 TMEM267Q0VDI3 215 aaPredicted RBP7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 ZNF562Q6V9R5 426 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 ETV3LQ6ZN32 361 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 LCNL1Q6ZST4 164 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PDPNQ86YL7 162 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 H1FOOQ8IZA3 346 aaPredicted RBP7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 BORCS5Q969J3 196 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 S100A16Q96FQ6 103 aaKnown RBP7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 OR2D2Q9H210 308 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PARP11Q9NR21 331 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 DIABLOQ9NR28 239 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 SLC35D1Q9NTN3 355 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 NECAP2Q9NVZ3 263 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 METTL1Q9UBP6 276 aaKnown RBP7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 NUBP2Q9Y5Y2 271 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 SORL1Q92673 2214 aa7.61□□□□□ -1.19
TNFRSF1A-214ENST00000543048 J3QRK9 145 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 SSX5O60225 188 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 TPPPO94811 219 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 SPDEFO95238 335 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 IGLV1-40P01703 118 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PRB2P02812 416 aaPredicted RBP7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 IGKV1-16P04430 117 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 RRASP10301 218 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 RAB9AP51151 201 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PPP5CP53041 499 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 CBX3Q13185 183 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 DCTN2Q13561 401 aaKnown RBP7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 IL18Q14116 193 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 ZNF79Q15937 498 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 TMEM69Q5SWH9 247 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PYHIN1Q6K0P9 492 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PPP1R27Q86WC6 154 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 MINDY2Q8NBR6 621 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 C15orf40Q8WUR7 153 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 NUDCD2Q8WVJ2 157 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 RAX2Q96IS3 184 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 ADTRPQ96IZ2 230 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 CLCC1Q96S66 551 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 P2RX4Q99571 388 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 SOSTQ9BQB4 213 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 MCRIP2Q9BUT9 160 aaKnown RBP7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 CCDC32Q9BV29 185 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 GPR61Q9BZJ8 451 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 SRRQ9GZT4 340 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PALMDQ9NP74 551 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 OR2W1Q9Y3N9 320 aa7.6□□□□□ -1.19
TNFRSF1A-214ENST00000543048 EREGO14944 169 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 XRCC3O43542 346 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 SLC22A5O76082 557 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 HLA-DQB1P01920 261 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 EGR2P11161 476 aaPredicted RBP7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 DUTP33316 252 aaKnown RBP7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 LUMP51884 338 aaPredicted RBP7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 CRIP2P52943 208 aaPredicted RBP7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 KIAA0141Q14154 515 aaPredicted RBP7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 RTL8BQ17RB0 113 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 AKIRIN2Q53H80 203 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 TMEM177Q53S58 311 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 PYDC2Q56P42 97 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 TCTEX1D1Q8N7M0 179 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 ZNF491Q8N8L2 437 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 GDPD1Q8N9F7 314 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 BVESQ8NE79 360 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 MYOZ3Q8TDC0 251 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 ABHD5Q8WTS1 349 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 UBE2E2Q96LR5 201 aa7.59□□□□□ -1.19
TNFRSF1A-214ENST00000543048 KLK15Q9H2R5 256 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.1 ms