RNA–Protein interactions for RNA: ENST00000542877.5

TNC-212, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 5,517 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-212ENST00000542877 SNRPCP09234 159 aaKnown RBP11.24□□□□□ -0.61
TNC-212ENST00000542877 OR10J6PQ8NGY7 276 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 TMEM54Q969K7 222 aa11.24□□□□□ -0.61
TNC-212ENST00000542877 PLAUP00749 431 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 FHITP49789 147 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 LOXL3P58215 753 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 KRTCAP3Q53RY4 240 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 MUC15Q8N387 334 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 PGLYRP4Q96LB8 373 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 TCF19Q9Y242 345 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.23□□□□□ -0.61
TNC-212ENST00000542877 ATG2BQ96BY7 2078 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 TRAV30A0A087WSZ9 112 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 GCSHP23434 173 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 CRYBB3P26998 211 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 UQCRFS1P47985 274 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 SFRP2Q96HF1 295 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 ZNF256Q9Y2P7 627 aaPredicted RBP11.23□□□□□ -0.61
TNC-212ENST00000542877 SEC16AO15027 2179 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 FBLL1A6NHQ2 334 aaKnown RBP11.23□□□□□ -0.61
TNC-212ENST00000542877 HLA-DRB1P01911 266 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 COX6CP09669 75 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 WFDC3Q8IUB2 231 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 GPHA2Q96T91 129 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 GGACTQ9BVM4 153 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 MAP1LC3AQ9H492 121 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 RGPD4Q7Z3J3 1758 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 J3QW42 95 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 PLP1P60201 277 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 PSG9Q00887 426 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 ASPHD2Q6ICH7 369 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 SHISA5Q8N114 240 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 OR51G1Q8NGK1 321 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 HS3ST3B1Q9Y662 390 aa11.23□□□□□ -0.61
TNC-212ENST00000542877 A0A0G2JK05 382 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 A0A1W2PS18 150 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 ADRA2AP08913 450 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 FXYD3Q14802 87 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 TMEM183AQ8IXX5 376 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 METTL26Q96S19 204 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 DYNLRB2Q8TF09 96 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 CKAP5Q14008 2032 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 A8MXK9 166 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 THY1P04216 161 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 FAM106CPP0CH98 169 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 EFNB1P98172 346 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 SLC25A45Q8N413 288 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 C16orf92Q96LL3 132 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 IGKV3-11P04433 115 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 ZNF146Q15072 292 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 OR10AG1Q8NH19 301 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 PARD6GQ9BYG4 376 aaPredicted RBP11.22□□□□□ -0.61
TNC-212ENST00000542877 IGHV3-72A0A0B4J1Y9 119 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 CA7P43166 264 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 NPBWR2P48146 333 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 TCTAP57738 103 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 DRAM1Q8N682 238 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 SYT8Q8NBV8 401 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 SRXN1Q9BYN0 137 aa11.22□□□□□ -0.61
TNC-212ENST00000542877 RP1P56715 2156 aa11.21□□□□□ -0.61
TNC-212ENST00000542877 MFAP4P55083 255 aa11.21□□□□□ -0.61
TNC-212ENST00000542877 REC114Q7Z4M0 266 aa11.21□□□□□ -0.61
TNC-212ENST00000542877 KLF14Q8TD94 323 aaPredicted RBP11.21□□□□□ -0.61
TNC-212ENST00000542877 NABP2Q9BQ15 211 aa11.21□□□□□ -0.61
TNC-212ENST00000542877 TM2D1Q9BX74 207 aa11.21□□□□□ -0.61
TNC-212ENST00000542877 COL4A1P02462 1669 aa11.21□□□□□ -0.61
TNC-212ENST00000542877 SPAARA0A1B0GVQ0 90 aa11.21□□□□□ -0.61
TNC-212ENST00000542877 PMCHL2Q9BQD1 86 aa11.21□□□□□ -0.61
TNC-212ENST00000542877 HILPDAQ9Y5L2 63 aa11.21□□□□□ -0.61
TNC-212ENST00000542877 ZNF729A6NN14 1252 aaPredicted RBP11.21□□□□□ -0.62
TNC-212ENST00000542877 SOD3P08294 240 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 EBLN2Q6P2I7 272 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 TMEM56-RWDD3S4R434 201 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 ZNFX1Q9P2E3 1918 aaKnown RBP11.21□□□□□ -0.62
TNC-212ENST00000542877 MYO16Q9Y6X6 1858 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 ZNF324O75467 553 aaPredicted RBP11.21□□□□□ -0.62
TNC-212ENST00000542877 COX6A1P12074 109 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 GCHFRP30047 84 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 ZNF362Q5T0B9 420 aaPredicted RBP11.21□□□□□ -0.62
TNC-212ENST00000542877 LAMTOR1Q6IAA8 161 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 TCF24Q7RTU0 167 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 GATAD1Q8WUU5 269 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 GUCD1Q96NT3 240 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 MIEN1Q9BRT3 115 aa11.21□□□□□ -0.62
TNC-212ENST00000542877 SLC25A17O43808 307 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 SS18L1O75177 396 aaPredicted RBP11.2□□□□□ -0.62
TNC-212ENST00000542877 LCN2P80188 198 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 DNLZQ5SXM8 178 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 GALNT14Q96FL9 552 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 DNAJC13O75165 2243 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 PLXNB2O15031 1838 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 CCL21O00585 134 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 FCGR2BP31994 310 aaPredicted RBP11.2□□□□□ -0.62
TNC-212ENST00000542877 OR4C13Q8NGP0 309 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 TMEM171Q8WVE6 324 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 SRSF12Q8WXF0 261 aaKnown RBP11.2□□□□□ -0.62
TNC-212ENST00000542877 CHRNA10Q9GZZ6 450 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 CBLN4Q9NTU7 201 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 CCDC88CQ9P219 2028 aa11.2□□□□□ -0.62
TNC-212ENST00000542877 UBR3Q6ZT12 1888 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms