RNA–Protein interactions for RNA: ENST00000542641.5

YBX3-213, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-213ENST00000542641 RTBDNQ9BSG5 229 aaPredicted RBP9.29□□□□□ -0.92
YBX3-213ENST00000542641 CHIAQ9BZP6 476 aa9.29□□□□□ -0.92
YBX3-213ENST00000542641 C5orf66Q9H5L9 145 aa9.29□□□□□ -0.92
YBX3-213ENST00000542641 COPZ2Q9P299 210 aa9.29□□□□□ -0.92
YBX3-213ENST00000542641 VSIG4Q9Y279 399 aa9.29□□□□□ -0.92
YBX3-213ENST00000542641 CUBNO60494 3623 aa9.29□□□□□ -0.92
YBX3-213ENST00000542641 FAM240BA0A1B0GVZ2 78 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 CLDN34H7C241 214 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 MPPED1O15442 326 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 FCGR3BO75015 233 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 NDUFB6O95139 128 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 IGKV1-16P04430 117 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 SLC6A1P30531 599 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 KIR2DS2P43631 304 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 RND3P61587 244 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 CCBE1Q6UXH8 406 aaPredicted RBP9.28□□□□□ -0.92
YBX3-213ENST00000542641 TMED4Q7Z7H5 227 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 PDPNQ86YL7 162 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 SPAG16Q8N0X2 631 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 OR4C13Q8NGP0 309 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 FLYWCH2Q96CP2 140 aaKnown RBP9.28□□□□□ -0.92
YBX3-213ENST00000542641 RITA1Q96K30 269 aa9.28□□□□□ -0.92
YBX3-213ENST00000542641 TEX13DA0A0J9YY54 714 aaPredicted RBP9.27□□□□□ -0.93
YBX3-213ENST00000542641 NCBP2LA6PVI3 153 aaKnown RBP9.27□□□□□ -0.93
YBX3-213ENST00000542641 PEX14O75381 377 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 OR2F2O95006 317 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 CRYZL1O95825 349 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 RNASE1P07998 156 aaKnown RBP9.27□□□□□ -0.93
YBX3-213ENST00000542641 AKR1C4P17516 323 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 F2RP25116 425 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 BRWD1-AS2P59051 145 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 RPS16P62249 146 aaKnown RBP9.27□□□□□ -0.93
YBX3-213ENST00000542641 UBA52P62987 128 aaKnown RBP9.27□□□□□ -0.93
YBX3-213ENST00000542641 DHRS7BQ6IAN0 325 aaPredicted RBP9.27□□□□□ -0.93
YBX3-213ENST00000542641 TCTEX1D1Q8N7M0 179 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 ADAD2Q8NCV1 583 aaKnown RBP9.27□□□□□ -0.93
YBX3-213ENST00000542641 OR4S2Q8NH73 311 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 ENKURQ8TC29 256 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 CD300LFQ8TDQ1 290 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 RBM14Q96PK6 669 aaKnown RBP9.27□□□□□ -0.93
YBX3-213ENST00000542641 RNF5Q99942 180 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 SLC25A33Q9BSK2 321 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 RAB18Q9NP72 206 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 PALMDQ9NP74 551 aa9.27□□□□□ -0.93
YBX3-213ENST00000542641 LIN7CQ9NUP9 197 aaKnown RBP9.27□□□□□ -0.93
YBX3-213ENST00000542641 C3orf85A0A1B0GTC6 90 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 TRIM77I1YAP6 450 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 SHOXO15266 292 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 CHST1O43916 411 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 GPR137BO60478 399 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 RAMP3O60896 148 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 TCRBP04435 133 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 F2RL1P55085 397 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 DCTN2Q13561 401 aaKnown RBP9.26□□□□□ -0.93
YBX3-213ENST00000542641 MMDQ15546 238 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 TMEM177Q53S58 311 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 C16orf82Q7Z2V1 217 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 SGPP2Q8IWX5 399 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 CENPSQ8N2Z9 138 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 Q8N6K4 173 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 OR8H1Q8NGG4 311 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 HARBI1Q96MB7 349 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 NAA60Q9H7X0 242 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 C1RLQ9NZP8 487 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 FLVCR2Q9UPI3 526 aa9.26□□□□□ -0.93
YBX3-213ENST00000542641 TRAV6A0A075B6T7 132 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 FAM181BA6NEQ2 426 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 CRYM-AS1A6NIL9 109 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 H0Y980 276 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 ARPC1BO15143 372 aaKnown RBP9.25□□□□□ -0.93
YBX3-213ENST00000542641 NBR2O15453 112 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 RBFOX2O43251 390 aaKnown RBP eCLIP9.25□□□□□ -0.93
YBX3-213ENST00000542641 HPRT1P00492 218 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 SERPINE2P07093 398 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 CNTFRP26992 372 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 LPAR6P43657 344 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 LGALS7P47929 136 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 SRSF2Q01130 221 aaKnown RBP9.25□□□□□ -0.93
YBX3-213ENST00000542641 SP6Q3SY56 376 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 TMEM128Q5BJH2 165 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 C11orf88Q6PI97 169 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 NRARPQ7Z6K4 114 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 OSR1Q8TAX0 266 aaPredicted RBP9.25□□□□□ -0.93
YBX3-213ENST00000542641 TMEM230Q96A57 120 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 TP53RKQ96S44 253 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 TSNAXQ99598 290 aaKnown RBP9.25□□□□□ -0.93
YBX3-213ENST00000542641 C20orf85Q9H1P6 137 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 PLSCR3Q9NRY6 295 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 NUDT15Q9NV35 164 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 KIAA1456Q9P272 454 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 KCNIP3Q9Y2W7 256 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 MOB4Q9Y3A3 225 aa9.25□□□□□ -0.93
YBX3-213ENST00000542641 SRRM4A7MD48 611 aaKnown RBP9.24□□□□□ -0.93
YBX3-213ENST00000542641 M0QZK8 103 aa9.24□□□□□ -0.93
YBX3-213ENST00000542641 B3GALNT1O75752 331 aa9.24□□□□□ -0.93
YBX3-213ENST00000542641 HRASP01112 189 aa9.24□□□□□ -0.93
YBX3-213ENST00000542641 CRYBA1P05813 215 aa9.24□□□□□ -0.93
YBX3-213ENST00000542641 OR5AC1P0C628 307 aa9.24□□□□□ -0.93
YBX3-213ENST00000542641 TAS2R31P59538 309 aa9.24□□□□□ -0.93
YBX3-213ENST00000542641 PLGLAQ15195 96 aa9.24□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms