RNA–Protein interactions for RNA: ENST00000542407.5

PDLIM5-221, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PDLIM5, Length 2,979 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-221ENST00000542407 BATF2Q8N1L9 274 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 TMEM217Q8N7C4 229 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 ULBP2Q9BZM5 246 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 LPAR5Q9H1C0 372 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 VPREB3Q9UKI3 123 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 FUT9Q9Y231 359 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 POLR1DQ9Y2S0 133 aa6.78□□□□□ -1.32
PDLIM5-221ENST00000542407 A0A1B0GW64 132 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 FAM166BA8MTA8 275 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 PPP5D1E7EU14 171 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 TOX4O94842 621 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 HSPB1P04792 205 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 MEOX1P50221 254 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 GRB2P62993 217 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 RUNX1Q01196 453 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 SRSF1Q07955 248 aaKnown RBP eCLIP6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 ADIRFQ15847 76 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 MPV17LQ2QL34 196 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 KRTAP27-1Q3LI81 207 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 FAM27BQ5VT28 67 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 OR51E1Q8TCB6 317 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 IL22RA2Q969J5 263 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 B4GALT7Q9UBV7 327 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 MRPS28Q9Y2Q9 187 aaKnown RBP6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 CELSR3Q9NYQ7 3312 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 TNFRSF13BO14836 293 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 DBHP09172 617 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 CCKARP32238 428 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 GNB2P62879 340 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 TOMM20LQ6UXN7 152 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 Q6ZSR3 168 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 FER1L6-AS1Q8NA97 138 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 OR51T1Q8NGJ9 327 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 SARAFQ96BY9 339 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 PERPQ96FX8 193 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 LYZL4Q96KX0 146 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 TMEM59Q9BXS4 323 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 CDH20Q9HBT6 801 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 LYRM2Q9NU23 88 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 LAMTOR2Q9Y2Q5 125 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 KLF13Q9Y2Y9 288 aaPredicted RBP6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 PAM16Q9Y3D7 125 aa6.77□□□□□ -1.33
PDLIM5-221ENST00000542407 MED13Q9UHV7 2174 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 IGSF23A1L1A6 192 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 NKX2-8O15522 239 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 CRYGSP22914 178 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 OR3A4PP47883 348 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 TMEM50BP56557 158 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 FXYD4P59646 89 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 EWSR1Q01844 656 aaKnown RBP eCLIP6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 ABCA11PQ4W5N1 156 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 PHLDA2Q53GA4 152 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 GJC3Q8NFK1 279 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 RBM24Q9BX46 236 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 QTRT1Q9BXR0 403 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 ELL3Q9HB65 397 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 AHCTF1Q8WYP5 2266 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 B4DEV8 164 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 ST8SIA3O43173 380 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 CST7O76096 145 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 NXPH3O95157 252 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 PIGPP57054 158 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 TAS2R46P59540 309 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 QRFPP83859 136 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 SRSF2Q01130 221 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 GAGE5Q13069 117 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 GAGE6Q13070 117 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF585BQ52M93 769 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF506Q5JVG8 444 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 FAM71F2Q6NXP2 309 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 SLC25A26Q70HW3 274 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 AAED1Q7RTV5 226 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 LHFPL1Q86WI0 220 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 DOLPP1Q86YN1 238 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 OR5AS1Q8N127 324 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 OR52E5Q8NH55 327 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 CLDND2Q8NHS1 167 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 SSC4DQ8WTU2 575 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 MS4A10Q96PG2 267 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 SRD5A3Q9H8P0 318 aa6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 CTNNBIP1Q9NSA3 81 aaPredicted RBP6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 MRPL27Q9P0M9 148 aaKnown RBP6.76□□□□□ -1.33
PDLIM5-221ENST00000542407 TRBV24-1A0A075B6N3 115 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 A0A1B0GUS0 222 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 SPRY1O43609 319 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 SYNGR3O43761 229 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 TUSC2O75896 110 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 ZNF20P17024 532 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 CFHR2P36980 270 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 GPR6P46095 362 aaPredicted RBP6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 TMPRSS3P57727 454 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 CRIP3Q6Q6R5 217 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 LCN15Q6UWW0 184 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 C5orf17Q8NAS9 161 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 OR5D14Q8NGL3 314 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 NRGNQ92686 78 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 C1orf159Q96HA4 380 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 P2RX4Q99571 388 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 CALHM2Q9HA72 323 aa6.75□□□□□ -1.33
PDLIM5-221ENST00000542407 GPR84Q9NQS5 396 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms