RNA–Protein interactions for RNA: ENST00000541586.5

CCM2-218, Transcript of CCM2 scaffold protein, humanhuman

TSL 3 BASIC

Gene CCM2, Length 1,719 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-218ENST00000541586 SPIN2BQ9BPZ2 258 aa22.58■■□□□ 1.21
CCM2-218ENST00000541586 MBD2Q9UBB5 411 aa22.58■■□□□ 1.21
CCM2-218ENST00000541586 H0YIZ8 118 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 ARPC5O15511 151 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 S1PR2O95136 353 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 Q8N7P7 452 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 CD300LFQ8TDQ1 290 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 DDB2Q92466 427 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 LSM10Q969L4 123 aaKnown RBP22.57■■□□□ 1.2
CCM2-218ENST00000541586 RNF126Q9BV68 326 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 F8P00451 2351 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 IGHV2-26A0A0B4J1V2 119 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 GATA3P23771 443 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 AKR1C2P52895 323 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 S100A10P60903 97 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 PAX8Q06710 450 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 ZNF833PQ6ZTB9 187 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 ZNF546Q86UE3 836 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 OR4D5Q8NGN0 318 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 GPR146Q96CH1 333 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 PCGF1Q9BSM1 259 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 PRELID3BQ9Y3B1 194 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 AUP1Q9Y679 476 aa22.57■■□□□ 1.2
CCM2-218ENST00000541586 FCGR3BO75015 233 aa22.56■■□□□ 1.2
CCM2-218ENST00000541586 CXCL2P19875 107 aa22.56■■□□□ 1.2
CCM2-218ENST00000541586 THBS3P49746 956 aa22.56■■□□□ 1.2
CCM2-218ENST00000541586 PRB3Q04118 309 aaPredicted RBP22.56■■□□□ 1.2
CCM2-218ENST00000541586 TMEM65Q6PI78 240 aa22.56■■□□□ 1.2
CCM2-218ENST00000541586 RNASE11Q8TAA1 199 aaKnown RBP22.56■■□□□ 1.2
CCM2-218ENST00000541586 M0R1W7 72 aa22.55■■□□□ 1.2
CCM2-218ENST00000541586 SCGB1D2O95969 90 aa22.55■■□□□ 1.2
CCM2-218ENST00000541586 MBPP02686 304 aaPredicted RBP22.55■■□□□ 1.2
CCM2-218ENST00000541586 THOC7Q6I9Y2 204 aaKnown RBP22.55■■□□□ 1.2
CCM2-218ENST00000541586 FOXRED2Q8IWF2 684 aa22.55■■□□□ 1.2
CCM2-218ENST00000541586 ZNF383Q8NA42 475 aa22.55■■□□□ 1.2
CCM2-218ENST00000541586 RRNAD1Q96FB5 475 aaKnown RBP22.55■■□□□ 1.2
CCM2-218ENST00000541586 ADTRPQ96IZ2 230 aa22.55■■□□□ 1.2
CCM2-218ENST00000541586 TOR1AO14656 332 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 TOX4O94842 621 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 IZUMO4Q1ZYL8 232 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 OR5AC2Q9NZP5 309 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 RBFOX2O43251 390 aaKnown RBP eCLIP22.54■■□□□ 1.25e-6■■■■■ 29.4
CCM2-218ENST00000541586 AVPP01185 164 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 PET100P0DJ07 73 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 CT45A6P0DMU7 189 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 CT45A5P0DMU8 189 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 CT45A7P0DMV0 189 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 EPHA1P21709 976 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 KIR2DS2P43631 304 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 PRSS54Q6PEW0 395 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 TNFRSF14Q92956 283 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 CLEC7AQ9BXN2 247 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 SIRT7Q9NRC8 400 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 TNFSF18Q9UNG2 199 aa22.54■■□□□ 1.2
CCM2-218ENST00000541586 A0A1B0GU03 582 aa22.53■■□□□ 1.2
CCM2-218ENST00000541586 KRASP01116 189 aa22.53■■□□□ 1.2
CCM2-218ENST00000541586 SLC25A6P12236 298 aa22.53■■□□□ 1.2
CCM2-218ENST00000541586 LYL1P12980 280 aa22.53■■□□□ 1.2
CCM2-218ENST00000541586 G6PCP35575 357 aa22.53■■□□□ 1.2
CCM2-218ENST00000541586 Q6ZRM9 215 aa22.53■■□□□ 1.2
CCM2-218ENST00000541586 KPTNQ9Y664 436 aa22.53■■□□□ 1.2
CCM2-218ENST00000541586 IGLV1-47P01700 117 aa22.52■■□□□ 1.2
CCM2-218ENST00000541586 COX7A1P24310 79 aa22.52■■□□□ 1.2
CCM2-218ENST00000541586 ZNF137PP52743 207 aa22.52■■□□□ 1.2
CCM2-218ENST00000541586 KIR3DL3Q8N743 410 aa22.52■■□□□ 1.2
CCM2-218ENST00000541586 OR1S1Q8NH92 325 aa22.52■■□□□ 1.2
CCM2-218ENST00000541586 ST6GALNAC6Q969X2 333 aa22.52■■□□□ 1.2
CCM2-218ENST00000541586 MFFQ9GZY8 342 aa22.52■■□□□ 1.2
CCM2-218ENST00000541586 PLEKHA2Q9HB19 425 aa22.52■■□□□ 1.2
CCM2-218ENST00000541586 LSM5Q9Y4Y9 91 aaKnown RBP22.52■■□□□ 1.2
CCM2-218ENST00000541586 MMP24Q9Y5R2 645 aa22.52■■□□□ 1.2
CCM2-218ENST00000541586 L7N2F9 121 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 SNAPC5O75971 98 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 ATG12O94817 140 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 HPRT1P00492 218 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 PRRX1P54821 245 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 FAM71F2Q6NXP2 309 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 VMO1Q7Z5L0 202 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 PDZD9Q8IXQ8 264 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 DCUN1D4Q92564 292 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 J3QLI3 93 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 K7EPK0 472 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 DEDDO75618 318 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 P0C879 139 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 DIAPH2-AS1Q14236 149 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 SMCO1Q147U7 214 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 HLA-DRB5Q30154 266 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 C1orf122Q6ZSJ8 110 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 FAM71E2Q8N5Q1 922 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 MRPL20Q9BYC9 149 aaKnown RBP22.51■■□□□ 1.19
CCM2-218ENST00000541586 SIRPDQ9H106 197 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 CACNG5Q9UF02 275 aa22.51■■□□□ 1.19
CCM2-218ENST00000541586 ST8SIA3O43173 380 aa22.5■■□□□ 1.19
CCM2-218ENST00000541586 PITX3O75364 302 aa22.5■■□□□ 1.19
CCM2-218ENST00000541586 MMP9P14780 707 aa22.5■■□□□ 1.19
CCM2-218ENST00000541586 PRTN3P24158 256 aa22.5■■□□□ 1.19
CCM2-218ENST00000541586 REG1BP48304 166 aa22.5■■□□□ 1.19
CCM2-218ENST00000541586 CXorf66Q5JRM2 361 aaPredicted RBP22.5■■□□□ 1.19
CCM2-218ENST00000541586 PNKDQ8N490 385 aa22.5■■□□□ 1.19
CCM2-218ENST00000541586 BEND2Q8NDZ0 799 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms