RNA–Protein interactions for RNA: ENST00000541260.5

CCDC189-204, Transcript of coiled-coil domain containing 189, human

TSL 5 BASIC

Gene CCDC189, Length 1,531 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCDC189-204	ENST00000541260	BEX1	Q9HBH7	125 aa		13.44	□□□□□ -0.26
CCDC189-204	ENST00000541260	LIN7C	Q9NUP9	197 aa	Known RBP	13.44	□□□□□ -0.26
CCDC189-204	ENST00000541260	COL6A5	A8TX70	2615 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	CLPSL1	A2RUU4	121 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	TNFSF12	O43508	249 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	PGLYRP1	O75594	196 aa	Predicted RBP	13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	BRWD1-AS2	P59051	145 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	RPS16	P62249	146 aa	Known RBP	13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	CATR1	Q13166	79 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	SURF2	Q15527	256 aa	Predicted RBP	13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	ABCA11P	Q4W5N1	156 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	OR51S1	Q8NGJ8	323 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	OR2T6	Q8NHC8	308 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	TCTEX1D2	Q8WW35	142 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	TSNAX	Q99598	290 aa	Known RBP	13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	HRASLS	Q9HDD0	168 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	SCP2D1	Q9UJQ7	156 aa		13.43	□□□□□ -0.26
CCDC189-204	ENST00000541260	RBFOX2	O43251	390 aa	Known RBP eCLIP	13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	SPDEF	O95238	335 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	IL7	P13232	177 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	MDK	P21741	143 aa	Predicted RBP	13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	CNTFR	P26992	372 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	CD40LG	P29965	261 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	KIR2DS2	P43631	304 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	PPP5C	P53041	499 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	AWAT1	Q58HT5	328 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260		Q6ZS46	218 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	OSR1	Q8TAX0	266 aa	Predicted RBP	13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	ZFAND1	Q8TCF1	268 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	MRGPRF	Q96AM1	343 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	GPHA2	Q96T91	129 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	RASL11B	Q9BPW5	248 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	CCDC32	Q9BV29	185 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	KIAA1456	Q9P272	454 aa		13.42	□□□□□ -0.26
CCDC189-204	ENST00000541260	RRH	O14718	337 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	FCGR3B	O75015	233 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	S100G	P29377	79 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	PSG5	Q15238	335 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	C5orf64	Q2M2E5	130 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	ZNF57	Q68EA5	555 aa	Predicted RBP	13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	IDO2	Q6ZQW0	420 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	TCTEX1D1	Q8N7M0	179 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	OR13C8	Q8NGS7	320 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	OR4S2	Q8NH73	311 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	MCUB	Q9NWR8	336 aa		13.41	□□□□□ -0.26
CCDC189-204	ENST00000541260	SHOX	O15266	292 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	CRYZL1	O95825	349 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	IGLV2-23	P01705	113 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	IGHG2	P01859	326 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	INPP1	P49441	399 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	RND3	P61587	244 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	MARCH1	Q8TCQ1	289 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	CD300LF	Q8TDQ1	290 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	HARBI1	Q96MB7	349 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	WDR12	Q9GZL7	423 aa	Known RBP	13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	SLC2A9	Q9NRM0	540 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	SERTAD4	Q9NUC0	356 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	RNF114	Q9Y508	228 aa		13.4	□□□□□ -0.26
CCDC189-204	ENST00000541260	SRRM4	A7MD48	611 aa	Known RBP	13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	HLA-DRB1	P01911	266 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	RLN1	P04808	185 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	CTSD	P07339	412 aa	Predicted RBP	13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	PGAM2	P15259	253 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	ZNF846	Q147U1	533 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	PHLDA2	Q53GA4	152 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	SPAG16	Q8N0X2	631 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	POC5	Q8NA72	575 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	OR51H1	Q8NH63	302 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	FAM212B	Q9NTI7	297 aa	Predicted RBP	13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	GPR132	Q9UNW8	380 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	SIGLEC9	Q9Y336	463 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	NAP1L6	A6NFF2	107 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	SH2D7	A6NKC9	451 aa	Predicted RBP	13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	RAMP3	O60896	148 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	PEX14	O75381	377 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	CRYGB	P07316	175 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	F2R	P25116	425 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	PROK1	P58294	105 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	OR2B11	Q5JQS5	317 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	LIN54	Q6MZP7	749 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	SCGB3A2	Q96PL1	93 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	C7orf50	Q9BRJ6	194 aa	Known RBP	13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	FBXL15	Q9H469	300 aa		13.39	□□□□□ -0.27
CCDC189-204	ENST00000541260	MPPED1	O15442	326 aa		13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	HPRT1	P00492	218 aa		13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	PIGP	P57054	158 aa		13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	UBE2K	P61086	200 aa		13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	C9orf152	Q5JTZ5	239 aa		13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	TBC1D26	Q86UD7	250 aa		13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	TEX45	Q8NA69	505 aa		13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	RTBDN	Q9BSG5	229 aa	Predicted RBP	13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	C5orf66	Q9H5L9	145 aa		13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	METTL1	Q9UBP6	276 aa	Known RBP	13.38	□□□□□ -0.27
CCDC189-204	ENST00000541260	KCNAB3	O43448	404 aa		13.37	□□□□□ -0.27
CCDC189-204	ENST00000541260	SLC25A17	O43808	307 aa		13.37	□□□□□ -0.27
CCDC189-204	ENST00000541260	VSIG10L2	P0DP72	767 aa		13.37	□□□□□ -0.27
CCDC189-204	ENST00000541260	PI3	P19957	117 aa		13.37	□□□□□ -0.27
CCDC189-204	ENST00000541260	VDAC2	P45880	294 aa	Predicted RBP	13.37	□□□□□ -0.27
CCDC189-204	ENST00000541260	VMA21	Q3ZAQ7	101 aa		13.37	□□□□□ -0.27
CCDC189-204	ENST00000541260	ARSJ	Q5FYB0	599 aa	Predicted RBP	13.37	□□□□□ -0.27

Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms