RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 OR51S1Q8NGJ8 323 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 VSTM2AQ8TAG5 236 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 DDB2Q92466 427 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 DUX5Q96PT3 197 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 RASL11BQ9BPW5 248 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 HRASLSQ9HDD0 168 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 COPZ2Q9P299 210 aa14.01□□□□□ -0.17
CLSTN3-210ENST00000540931 IGHV3-72A0A0B4J1Y9 119 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 NBR2O15453 112 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 ATG12O94817 140 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 IGLV2-14P01704 120 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 RPA2P15927 270 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 RPS16P62249 146 aaKnown RBP14□□□□□ -0.17
CLSTN3-210ENST00000540931 MMDQ15546 238 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 BAK1Q16611 211 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 KRTAP24-1Q3LI83 254 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 DRAXINQ8NBI3 349 aaPredicted RBP14□□□□□ -0.17
CLSTN3-210ENST00000540931 OR4D10Q8NGI6 311 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 OR2T6Q8NHC8 308 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 FXYD6Q9H0Q3 95 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 C16orf95Q9H693 158 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 BEX1Q9HBH7 125 aa14□□□□□ -0.17
CLSTN3-210ENST00000540931 SHOXO15266 292 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 KCNAB3O43448 404 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 PGLYRP1O75594 196 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 HPRT1P00492 218 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 F2RP25116 425 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 PAX6P26367 422 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 EIF4EBP1Q13541 118 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 RBMS2Q15434 407 aaKnown RBP13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 VMA21Q3ZAQ7 101 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 MZT2BQ6NZ67 158 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 CCBE1Q6UXH8 406 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 SDHCQ99643 169 aaPredicted RBP13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 SLC2A9Q9NRM0 540 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 KCNIP3Q9Y2W7 256 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 MMP24Q9Y5R2 645 aa13.99□□□□□ -0.17
CLSTN3-210ENST00000540931 LINC00473A8K010 186 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 FCGR3BO75015 233 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 NDUFA3O95167 84 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 CD24P25063 80 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 DEFA1P59665 94 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 DEFA3P59666 94 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 HNF4GQ14541 408 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 ARSJQ5FYB0 599 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 GLDNQ6ZMI3 551 aaPredicted RBP13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 TMEM219Q86XT9 240 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 CADM3Q8N126 398 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 Q8N2B8 174 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 HARBI1Q96MB7 349 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 GON7Q9BXV9 100 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 PLEKHA2Q9HB19 425 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 COMMD9Q9P000 198 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 GPR132Q9UNW8 380 aa13.98□□□□□ -0.17
CLSTN3-210ENST00000540931 TMEM89A2RUT3 159 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 MPPED1O15442 326 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 FGF2P09038 288 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 RAG2P55895 527 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 PIGPP57054 158 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 TAS2R31P59538 309 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 PLGLAQ15195 96 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 SPAG16Q8N0X2 631 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 C5orf56Q8N8D9 126 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 TEX45Q8NA69 505 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 OR13C8Q8NGS7 320 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 MARCH1Q8TCQ1 289 aa13.97□□□□□ -0.17
CLSTN3-210ENST00000540931 RRHO14718 337 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 UPK1BO75841 260 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 CRYZL1O95825 349 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 RLN1P04808 185 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 SERPINE2P07093 398 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 ANXA3P12429 323 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 NQO2P16083 231 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 UBE2MP61081 183 aaKnown RBP13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 ERVK-16P61578 105 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 C5orf64Q2M2E5 130 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 LIN54Q6MZP7 749 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 SGPP2Q8IWX5 399 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 FAM71E2Q8N5Q1 922 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 OR51H1Q8NH63 302 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 OR4A5Q8NH83 315 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 C5orf30Q96GV9 206 aa13.96□□□□□ -0.17
CLSTN3-210ENST00000540931 ANK2Q01484 3957 aa13.96□□□□□ -0.18
CLSTN3-210ENST00000540931 H0Y980 276 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 LYRM1O43325 122 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 TNFSF12O43508 249 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 CHST1O43916 411 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 PEX14O75381 377 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 HLA-DRB1P01911 266 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 IGKV1-16P04430 117 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 COMPP49747 757 aaPredicted RBP13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 UBE2KP61086 200 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 DHODHQ02127 395 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 PHLDA2Q53GA4 152 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 FAAP20Q6NZ36 180 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 TBC1D26Q86UD7 250 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 FOXRED2Q8IWF2 684 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 Q8N9W7 124 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 TSC22D3Q99576 134 aa13.95□□□□□ -0.18
CLSTN3-210ENST00000540931 PLSCR3Q9NRY6 295 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms