RNA–Protein interactions for RNA: ENST00000540865.5

SNHG1-214, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 784 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-214ENST00000540865 TSNAXQ99598 290 aaKnown RBP3.37□□□□□ -1.87
SNHG1-214ENST00000540865 SULT4A1Q9BR01 284 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 PRRG3Q9BZD7 231 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 HRH4Q9H3N8 390 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 SPACA1Q9HBV2 294 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 SCRT2Q9NQ03 307 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 FGFR1OP2Q9NVK5 253 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 IL36GQ9NZH8 169 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF581Q9P0T4 197 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 PIPOXQ9P0Z9 390 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 GNG8Q9UK08 70 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 ING4Q9UNL4 249 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 WASHC3Q9Y3C0 194 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 LRRC42Q9Y546 428 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 GMPPBQ9Y5P6 360 aa3.37□□□□□ -1.87
SNHG1-214ENST00000540865 TRBV9A0A0B4J1U6 114 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 FAM90A23PA8MXZ1 464 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 C16orf90A8MZG2 172 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 H7C2Y5 167 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 RAB29O14966 203 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 GGCTO75223 188 aaKnown RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 CST1P01037 141 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 RPSAP08865 295 aaKnown RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 SCTP09683 121 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 P0DMU3 169 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 FAM231AP0DMU4 169 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 FAM231CP0DMU5 169 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 ANXA8P13928 327 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 RCC1P18754 421 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 EDN2P20800 178 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 ATP6V1B2P21281 511 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 PPP1CCP36873 323 aaKnown RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 CRISP1P54107 249 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 SSBP2P81877 361 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 DEFA5Q01523 94 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 ATP5G2Q06055 141 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 EXOSC2Q13868 293 aaKnown RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 GNMTQ14749 295 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 PTGES3Q15185 160 aaKnown RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 TP53I3Q53FA7 332 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 ATAD3CQ5T2N8 411 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 PVRIGQ6DKI7 326 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 GPHB5Q86YW7 130 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 SLC38A6Q8IZM9 456 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 PARP16Q8N5Y8 322 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 UXS1Q8NBZ7 420 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 ADAD2Q8NCV1 583 aaKnown RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 OR2AK2Q8NG84 335 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 OR10H4Q8NGA5 316 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 OR51A4Q8NGJ6 313 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 OR1L6Q8NGR2 347 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 OR4K15Q8NH41 348 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 TMEM163Q8TC26 289 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 NEK7Q8TDX7 302 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 DNAJC9Q8WXX5 260 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 TRIM63Q969Q1 353 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 ASB9Q96DX5 294 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 PELI1Q96FA3 418 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 GPER1Q99527 375 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 RARRES2Q99969 163 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 FAM192AQ9GZU8 254 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 METTL9Q9H1A3 318 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 IFI27L2Q9H2X8 130 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 MAP6D1Q9H9H5 199 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 TAF9BQ9HBM6 251 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 PAK1IP1Q9NWT1 392 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 COA4Q9NYJ1 87 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 KCNIP1Q9NZI2 227 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 WARS2Q9UGM6 360 aaKnown RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 MLXQ9UH92 298 aa3.36□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF230Q9UIE0 474 aaPredicted RBP3.36□□□□□ -1.87
SNHG1-214ENST00000540865 IGHV4-4A0A075B6R2 117 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 TMEM213A2RRL7 107 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 OR4C45A6NMZ5 311 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 MPTX1A8MV57 137 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 A8MWP6 167 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 MCRIP1C9JLW8 97 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 M0R2N4 97 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 GNGT2O14610 69 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 ITGB1BP1O14713 200 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF780AO75290 641 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-214ENST00000540865 GPX5O75715 221 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 SC5DO75845 299 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 CDRT1O95170 752 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 FAM107AO95990 144 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 MAS1P04201 325 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 IGKV1-16P04430 117 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 GLAP06280 429 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 HTR1AP08908 422 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 OR9G9P0C7N8 305 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 T-ENOLP0DO92 83 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 GTF2F2P13984 249 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 RAB3AP20336 220 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 PRKACGP22612 351 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 FCGR2BP31994 310 aaPredicted RBP3.35□□□□□ -1.87
SNHG1-214ENST00000540865 SOX2P48431 317 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 RHOGP84095 191 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 ZNF85Q03923 595 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 TMED1Q13445 227 aa3.35□□□□□ -1.87
SNHG1-214ENST00000540865 KLF9Q13886 244 aaPredicted RBP3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms