RNA–Protein interactions for RNA: ENST00000540846.6

SMAD3-204, Transcript of SMAD family member 3, humanhuman

TSL 1 (best) BASIC

Gene SMAD3, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-204ENST00000540846 CD300LFQ8TDQ1 290 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 NEIL1Q96FI4 390 aaPredicted RBP10.22□□□□□ -0.77
SMAD3-204ENST00000540846 PIMREGQ9BSJ6 248 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 MAGT1Q9H0U3 335 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 NARFLQ9H6Q4 476 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 LYRM2Q9NU23 88 aaPredicted RBP10.22□□□□□ -0.77
SMAD3-204ENST00000540846 MIOXQ9UGB7 285 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 ZANQ9Y493 2812 aa10.22□□□□□ -0.77
SMAD3-204ENST00000540846 ANKRD34BA5PLL1 514 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 FAM90A26D6RGX4 464 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 MMP23AO75900 390 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 TMEM50AO95807 157 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 VAMP2P63027 116 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 EWSR1Q01844 656 aaKnown RBP eCLIP10.21□□□□□ -0.78
SMAD3-204ENST00000540846 ZNF816Q0VGE8 651 aaPredicted RBP10.21□□□□□ -0.78
SMAD3-204ENST00000540846 IZUMO4Q1ZYL8 232 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 Q5PR19 223 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 FAM74A1Q5RGS3 127 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 PRAMEF5Q5TYX0 476 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 WDR25Q64LD2 544 aaPredicted RBP10.21□□□□□ -0.78
SMAD3-204ENST00000540846 RPL7L1Q6DKI1 246 aaKnown RBP10.21□□□□□ -0.78
SMAD3-204ENST00000540846 PRSS57Q6UWY2 283 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 HEPN1Q6WQI6 88 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 PDZD9Q8IXQ8 264 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 ZNF714Q96N38 554 aa10.21□□□□□ -0.78
SMAD3-204ENST00000540846 SAA2-SAA4A0A096LPE2 208 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 IGSF23A1L1A6 192 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 M0R1X1 148 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 WRBO00258 174 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 JTBO76095 146 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 SAA2P0DJI9 122 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-204ENST00000540846 NFYBP25208 207 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 KIR2DS2P43631 304 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 RPL39P5Q59GN2 51 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 NCR3LG1Q68D85 454 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 TMEM200BQ69YZ2 307 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 SLC25A48Q6ZT89 311 aaKnown RBP10.2□□□□□ -0.78
SMAD3-204ENST00000540846 COMMD7Q86VX2 200 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 ODF3L1Q8IXM7 274 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 UBAC2Q8NBM4 344 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 OR8B3Q8NGG8 313 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 LEAP2Q969E1 77 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 BSCL2Q96G97 398 aaPredicted RBP10.2□□□□□ -0.78
SMAD3-204ENST00000540846 CXorf58Q96LI9 332 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 OR8B2Q96RD0 313 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 RAB40CQ96S21 281 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 ZNF251Q9BRH9 671 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 SLC25A31Q9H0C2 315 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 SETXQ7Z333 2677 aaKnown RBP10.2□□□□□ -0.78
SMAD3-204ENST00000540846 AKAP9Q99996 3911 aa10.2□□□□□ -0.78
SMAD3-204ENST00000540846 CREBBPQ92793 2442 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 TRBV23-1A0A0A0MS06 115 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 A8MXK9 166 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 RAB29O14966 203 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 CHST1O43916 411 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 IGHV3-7P01780 117 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 G6PCP35575 357 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 CAV2P51636 162 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 PAX9P55771 341 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 LINC00205P59089 165 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 BAXQ07812 192 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 MIDNQ504T8 468 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 TMEM252Q8N6L7 170 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 TMED6Q8WW62 240 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 DDB2Q92466 427 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 H1FXQ92522 213 aaKnown RBP10.19□□□□□ -0.78
SMAD3-204ENST00000540846 CITED4Q96RK1 184 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 SMIM3Q9BZL3 60 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 ARV1Q9H2C2 271 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 OTOGQ6ZRI0 2925 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 MYO9AB2RTY4 2548 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 NOTCH2Q04721 2471 aa10.19□□□□□ -0.78
SMAD3-204ENST00000540846 FAM24AA6NFZ4 105 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 C22orf46C9J442 243 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 TOR1AO14656 332 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 FGF16O43320 207 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 SYNGR2O43760 224 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 NXPH3O95157 252 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 KRASP01116 189 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 SLC25A16P16260 332 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 CCL3L1P16619 93 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 DLX6P56179 175 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 PAX2Q02962 417 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 EIF5AL1Q6IS14 154 aaKnown RBP10.18□□□□□ -0.78
SMAD3-204ENST00000540846 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.18□□□□□ -0.783e-7■■■□□ 16.9
SMAD3-204ENST00000540846 C8orf46Q8TAG6 207 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 ADTRPQ96IZ2 230 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 FOXC2Q99958 501 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 HSPB7Q9UBY9 170 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 PRELID3BQ9Y3B1 194 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 WSB1Q9Y6I7 421 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 FLNAP21333 2647 aaKnown RBP10.18□□□□□ -0.78
SMAD3-204ENST00000540846 BORCS7-ASMTA0A0B4J1R7 106 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 A0A1W2PPE3 182 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 MARCH11A6NNE9 402 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 FAM90A9PA6NNJ1 464 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 GPR37O15354 613 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 HPRT1P00492 218 aa10.18□□□□□ -0.78
SMAD3-204ENST00000540846 ZFP36P26651 326 aaKnown RBP10.18□□□□□ -0.78
SMAD3-204ENST00000540846 THBS3P49746 956 aa10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms