RNA–Protein interactions for RNA: ENST00000540819.1

PRKDC-209, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-209ENST00000540819 CXorf21Q9HAI6 301 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 SLC23A2Q9UGH3 650 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 TBX21Q9UL17 535 aa3.74□□□□□ -1.81
PRKDC-209ENST00000540819 A0A087WYN8 130 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 IGHV3-49A0A0A0MS15 119 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 MIF4GDA9UHW6 222 aaKnown RBP3.73□□□□□ -1.81
PRKDC-209ENST00000540819 GSTZ1O43708 216 aaPredicted RBP3.73□□□□□ -1.81
PRKDC-209ENST00000540819 OR7C2O60412 319 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 CST8O60676 142 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 PDYNP01213 254 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 BPGMP07738 259 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 RBP1P09455 135 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 TFPTP0C1Z6 253 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 PPIBP23284 216 aaKnown RBP3.73□□□□□ -1.81
PRKDC-209ENST00000540819 G6PCP35575 357 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 CCR6P51684 374 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 ZNF140P52738 457 aaPredicted RBP3.73□□□□□ -1.81
PRKDC-209ENST00000540819 DEFA1P59665 94 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 GRK1Q15835 563 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 C9orf129Q5T035 196 aaKnown RBP3.73□□□□□ -1.81
PRKDC-209ENST00000540819 LAIR2Q6ISS4 152 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 C1orf174Q8IYL3 243 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 C15orf56Q8N910 161 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 GPR119Q8TDV5 335 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 C2orf15Q8WU43 125 aaKnown RBP3.73□□□□□ -1.81
PRKDC-209ENST00000540819 TMEM158Q8WZ71 300 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 CAPZA3Q96KX2 299 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 VGLL1Q99990 258 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 C1orf50Q9BV19 199 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 C20orf27Q9GZN8 174 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 CCDC90BQ9GZT6 254 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 TPT1P8Q9HAU6 139 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 GPR84Q9NQS5 396 aa3.73□□□□□ -1.81
PRKDC-209ENST00000540819 SVILO95425 2214 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 DICER1Q9UPY3 1922 aaKnown RBP3.72□□□□□ -1.81
PRKDC-209ENST00000540819 A0A1W2PQ67 120 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 SMIM24O75264 130 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 CCNKO75909 580 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 PIAS1O75925 651 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 S100A2P29034 98 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 OPRM1P35372 400 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 DAPP51397 102 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 GTF3C1Q12789 2109 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 SCGB2B2Q4G0G5 96 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 GLT8D1Q68CQ7 371 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 RPL13AP3Q6NVV1 102 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 UNQ9165/PRO28630Q6UXU0 137 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 Q6ZS49 121 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 TCF24Q7RTU0 167 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 SGPP2Q8IWX5 399 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 C12orf45Q8N5I9 185 aaPredicted RBP3.72□□□□□ -1.81
PRKDC-209ENST00000540819 Q8N976 141 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 OR4D11Q8NGI4 311 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 OR13C8Q8NGS7 320 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 MBD3L1Q8WWY6 194 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 PDXPQ96GD0 296 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 NRTNQ99748 197 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 MRPS16Q9Y3D3 137 aaKnown RBP3.72□□□□□ -1.81
PRKDC-209ENST00000540819 ASB4Q9Y574 426 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 TICRRQ7Z2Z1 1910 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 PLXNB3Q9ULL4 1909 aa3.72□□□□□ -1.81
PRKDC-209ENST00000540819 PTPRJQ12913 1337 aa3.71□□□□□ -1.81
PRKDC-209ENST00000540819 GPATCH8Q9UKJ3 1502 aaKnown RBP3.71□□□□□ -1.82
PRKDC-209ENST00000540819 TRBV19A0A075B6N1 114 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 IGHV3OR15-7A0A075B7D8 119 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 IGHV3-64DA0A0J9YX35 117 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 NKX2-6A6NCS4 301 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 LST1O00453 97 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 COX7A2LO14548 114 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 DEGS1O15121 323 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 IFNA7P01567 189 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 IGLV3-25P01717 112 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 HLA-DQA1P01909 254 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 TLX1NBP0CAT3 122 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 RPS4Y1P22090 263 aaKnown RBP3.71□□□□□ -1.82
PRKDC-209ENST00000540819 SDC4P31431 198 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 PSMD8P48556 350 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 TAF6P49848 677 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 LHX2P50458 406 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 CRIP2P52943 208 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-209ENST00000540819 EMP1P54849 157 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 KRTAP10-5P60370 271 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 CKS1BP61024 79 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 TBPL1P62380 186 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 RPS28P62857 69 aaKnown RBP3.71□□□□□ -1.82
PRKDC-209ENST00000540819 LOXL1Q08397 574 aaPredicted RBP3.71□□□□□ -1.82
PRKDC-209ENST00000540819 RHEBQ15382 184 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 ANGPTL5Q86XS5 388 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 LRRC18Q8N456 261 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 KRTCAP2Q8N6L1 136 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 Q8N7P7 452 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 CCDC115Q96NT0 180 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 TMEM38BQ9NVV0 291 aa3.71□□□□□ -1.82
PRKDC-209ENST00000540819 BORCS7-ASMTA0A0B4J1R7 106 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 TRAV4A0A0B4J268 109 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 LINC00862A6NCI5 91 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 RIIAD1A6NNX1 92 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 A8MUN3 132 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 SULT1C4O75897 302 aa3.7□□□□□ -1.82
PRKDC-209ENST00000540819 OR2J2O76002 312 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms