RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 NAV3Q8IVL0 2385 aa12.53□□□□□ -0.4
DDB1-216ENST00000539739 C9orf170A2RU37 121 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 DISC1C4P0D8 188 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 INAFM1C9JVW0 142 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 TUSC2O75896 110 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 OR8U9P0C7N5 309 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 LUMP51884 338 aaPredicted RBP12.52□□□□□ -0.4
DDB1-216ENST00000539739 HERV-K104P61576 105 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 LIN54Q6MZP7 749 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 LYG1Q8N1E2 194 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 PIP4P2Q8N4L2 257 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 ARRDC1Q8N5I2 433 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 OR8U1Q8NH10 309 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 PFDN5Q99471 154 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 PARP12Q9H0J9 701 aaKnown RBP12.52□□□□□ -0.4
DDB1-216ENST00000539739 PIPOXQ9P0Z9 390 aa12.52□□□□□ -0.4
DDB1-216ENST00000539739 METTL1Q9UBP6 276 aaKnown RBP12.52□□□□□ -0.4
DDB1-216ENST00000539739 RAB29O14966 203 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 PPYP01298 95 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 AMY2AP04746 511 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 SRD5A1P18405 259 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 AADACP22760 399 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 KLF9Q13886 244 aaPredicted RBP12.51□□□□□ -0.41
DDB1-216ENST00000539739 OPCMLQ14982 345 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 OR2B11Q5JQS5 317 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 ETV3LQ6ZN32 361 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 C9orf139Q6ZV77 190 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 OR4C16Q8NGL9 310 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 MALSU1Q96EH3 234 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 ZNRD1Q9P1U0 126 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 APOC3P02656 99 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 GPR12P47775 334 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 FCN2Q15485 313 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 REC114Q7Z4M0 266 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 LHFPL4Q7Z7J7 247 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 SVBPQ8N300 66 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 RPEQ96AT9 228 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 S1PR3Q99500 378 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 AGMATQ9BSE5 352 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 RNF150Q9ULK6 438 aa12.51□□□□□ -0.41
DDB1-216ENST00000539739 FXYD4P59646 89 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 SCGB2B2Q4G0G5 96 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 TPTE2P1Q5T6R2 138 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 ZNF660Q6AZW8 331 aaPredicted RBP12.5□□□□□ -0.41
DDB1-216ENST00000539739 OR56B4Q8NH76 319 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 C22orf15Q8WYQ4 148 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 TOMM40LQ969M1 308 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 ABHD14BQ96IU4 210 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 SLC6A7Q99884 636 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 OR2D2Q9H210 308 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 SLC25A32Q9H2D1 315 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 IFI27L2Q9H2X8 130 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 HRASLSQ9HDD0 168 aa12.5□□□□□ -0.41
DDB1-216ENST00000539739 A0A0U1RQK1 487 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 C5orf52A6NGY3 159 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 FAM74A7A6NL05 159 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 OOSP1A8MZH6 123 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 SMLR1H3BR10 107 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 GAPDHP04406 335 aaKnown RBP12.49□□□□□ -0.41
DDB1-216ENST00000539739 ZNF137PP52743 207 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 SMCO1Q147U7 214 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 FAM74A3Q4VXF1 159 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 CCDC144NLQ6NUI1 221 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 FAAP20Q6NZ36 180 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 ZNF436-AS1Q8NC38 126 aaPredicted RBP12.49□□□□□ -0.41
DDB1-216ENST00000539739 SECTM1Q8WVN6 248 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 TCTEX1D2Q8WW35 142 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 MOB3AQ96BX8 217 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 PRRT1Q99946 306 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 C7orf50Q9BRJ6 194 aaKnown RBP12.49□□□□□ -0.41
DDB1-216ENST00000539739 GAB2Q9UQC2 676 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 HILPDAQ9Y5L2 63 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 NUBP2Q9Y5Y2 271 aa12.49□□□□□ -0.41
DDB1-216ENST00000539739 SAA2-SAA4A0A096LPE2 208 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 NAP1L6A6NFF2 107 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 LY6LH3BQJ8 138 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 HSD17B6O14756 317 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 TXNL1O43396 289 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 SAA2P0DJI9 122 aaPredicted RBP12.48□□□□□ -0.41
DDB1-216ENST00000539739 SULT1A3P0DMM9 295 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 SULT1A4P0DMN0 295 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 SLC6A1P30531 599 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 HNF4GQ14541 408 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 AARDQ4LEZ3 155 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 SAPCD1Q5SSQ6 148 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 LDLRAD2Q5SZI1 272 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 FAM71F2Q6NXP2 309 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 LPCAT3Q6P1A2 487 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 ODF3L1Q8IXM7 274 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 BCL6BQ8N143 479 aaPredicted RBP12.48□□□□□ -0.41
DDB1-216ENST00000539739 ZNF645Q8N7E2 425 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 TERB2Q8NHR7 220 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 SLC5A7Q9GZV3 580 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 TMPRSS5Q9H3S3 457 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 ZFP57Q9NU63 452 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 CHTOPQ9Y3Y2 248 aaKnown RBP12.48□□□□□ -0.41
DDB1-216ENST00000539739 MTORP42345 2549 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 IGKV1D-13A0A0B4J2D9 117 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 CRLF1O75462 422 aa12.48□□□□□ -0.41
DDB1-216ENST00000539739 ZNF735P0CB33 412 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 91.1 ms