RNA–Protein interactions for RNA: ENST00000539244.6

SS18-204, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 977 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-204ENST00000539244 CD81P60033 236 aa10.26□□□□□ -0.77
SS18-204ENST00000539244 P2RY14Q15391 338 aa10.26□□□□□ -0.77
SS18-204ENST00000539244 SPHARQ15513 63 aa10.26□□□□□ -0.77
SS18-204ENST00000539244 CD300EQ496F6 205 aaPredicted RBP10.26□□□□□ -0.77
SS18-204ENST00000539244 FAM223AQ8IWN6 122 aa10.26□□□□□ -0.77
SS18-204ENST00000539244 TEX45Q8NA69 505 aa10.26□□□□□ -0.77
SS18-204ENST00000539244 C5orf30Q96GV9 206 aa10.26□□□□□ -0.77
SS18-204ENST00000539244 NEURL2Q9BR09 285 aa10.26□□□□□ -0.77
SS18-204ENST00000539244 PLEKHA3Q9HB20 300 aa10.26□□□□□ -0.77
SS18-204ENST00000539244 PLGRKTQ9HBL7 147 aa10.26□□□□□ -0.77
SS18-204ENST00000539244 ZNF230Q9UIE0 474 aaPredicted RBP10.26□□□□□ -0.77
SS18-204ENST00000539244 TRBV6-7A0A0A0MS04 114 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 RBMY1BA6NDE4 496 aaKnown RBP10.25□□□□□ -0.77
SS18-204ENST00000539244 RBMY1EA6NEQ0 496 aaKnown RBP10.25□□□□□ -0.77
SS18-204ENST00000539244 MSGN1A6NI15 193 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 ZNF785A8K8V0 405 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 TPPPO94811 219 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 RBMY1DP0C7P1 496 aaKnown RBP10.25□□□□□ -0.77
SS18-204ENST00000539244 UBE2KP61086 200 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 CBX3Q13185 183 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 PRSS8Q16651 343 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 RTL8BQ17RB0 113 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 TMEM91Q6ZNR0 172 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 OR56B1Q8NGI3 324 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 SRSF12Q8WXF0 261 aaKnown RBP10.25□□□□□ -0.77
SS18-204ENST00000539244 DDB2Q92466 427 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 PHB2Q99623 299 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 FAM110AQ9BQ89 295 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 AKIP1Q9NQ31 210 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 ZC4H2Q9NQZ6 224 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 SLC2A8Q9NY64 477 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 KCNK7Q9Y2U2 307 aa10.25□□□□□ -0.77
SS18-204ENST00000539244 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP10.24□□□□□ -0.77
SS18-204ENST00000539244 CD7P09564 240 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 CD3GP09693 182 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 APELAP0DMC3 54 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 RHOGP84095 191 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 ZNF45Q02386 682 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 TPBGQ13641 420 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 RAB11BQ15907 218 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 VMA21Q3ZAQ7 101 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 IGSF11Q5DX21 431 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 FAM209BQ5JX69 171 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 OR10J5Q8NHC4 309 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 ADTRPQ96IZ2 230 aa10.24□□□□□ -0.77
SS18-204ENST00000539244 AK6Q9Y3D8 172 aaKnown RBP10.24□□□□□ -0.77
SS18-204ENST00000539244 BET1O15155 118 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 FCGR3AP08637 254 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 GSTT2P0CG29 244 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 GSTT2BP0CG30 244 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 DUTP33316 252 aaKnown RBP10.23□□□□□ -0.77
SS18-204ENST00000539244 RANBP1P43487 201 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 EXOSC2Q13868 293 aaKnown RBP10.23□□□□□ -0.77
SS18-204ENST00000539244 IRF3Q14653 427 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 MED22Q15528 200 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 TNXAQ16473 311 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 DEFB114Q30KQ6 69 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 C2orf76Q3KRA6 126 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 LIPKQ5VXJ0 399 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 DEFB125Q8N687 156 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 OSR1Q8TAX0 266 aaPredicted RBP10.23□□□□□ -0.77
SS18-204ENST00000539244 UFD1Q92890 307 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 FAM3DQ96BQ1 224 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 KCTD12Q96CX2 325 aaKnown RBP10.23□□□□□ -0.77
SS18-204ENST00000539244 DMRT1Q9Y5R6 373 aa10.23□□□□□ -0.77
SS18-204ENST00000539244 DENRO43583 198 aaKnown RBP10.22□□□□□ -0.77
SS18-204ENST00000539244 TUSC2O75896 110 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 ARL6IP5O75915 188 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 CRYZL1O95825 349 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 KIR2DS2P43631 304 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 CLDN12P56749 244 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 MRPS15P82914 257 aaKnown RBP10.22□□□□□ -0.77
SS18-204ENST00000539244 ATP5G2Q06055 141 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 TRAM1Q15629 374 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 OGFRL1Q5TC84 451 aaPredicted RBP10.22□□□□□ -0.77
SS18-204ENST00000539244 TTC9CQ8N5M4 171 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 NECAP1Q8NC96 275 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 TMEM203Q969S6 136 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 SPIN2AQ99865 258 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 SPIN2BQ9BPZ2 258 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 CENPOQ9BU64 300 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 SRD5A3Q9H8P0 318 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 TECRQ9NZ01 308 aaKnown RBP10.22□□□□□ -0.77
SS18-204ENST00000539244 RAB22AQ9UL26 194 aa10.22□□□□□ -0.77
SS18-204ENST00000539244 TMEM272A0A1B0GTI8 110 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 C2orf70A6NJV1 201 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 LINC00473A8K010 186 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 OR11H12B2RN74 326 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 PTGES3LE9PB15 166 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 LGALS9O00182 355 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 CASQ2O14958 399 aaPredicted RBP10.21□□□□□ -0.77
SS18-204ENST00000539244 MPPED1O15442 326 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 CREBL2O60519 120 aaPredicted RBP10.21□□□□□ -0.77
SS18-204ENST00000539244 PRH1P02810 166 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 PSMA1P25786 263 aaKnown RBP10.21□□□□□ -0.77
SS18-204ENST00000539244 PLA2G7Q13093 441 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 CDK10Q15131 360 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 IDO2Q6ZQW0 420 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 Q6ZS49 121 aa10.21□□□□□ -0.77
SS18-204ENST00000539244 DYNLRB2Q8TF09 96 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms