RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 C1QTNF6Q9BXI9 259 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 TBL1XR1Q9BZK7 514 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 DRC3Q9H069 523 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 ALX4Q9H161 411 aaPredicted RBP0.6□□□□□ -2.31
HIF1A-204ENST00000539097 TMEM133Q9H2Q1 129 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 OR51I2Q9H344 312 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 OR52D1Q9H346 318 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 C19orf12Q9NSK7 152 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 FGFR1OP2Q9NVK5 253 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 NKIRAS1Q9NYS0 192 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 IDI2-AS1Q9NZ38 188 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 USE1Q9NZ43 259 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 PCYOX1Q9UHG3 505 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 JPT1Q9UK76 154 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 RAB22AQ9UL26 194 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 ANGPT4Q9Y264 503 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 PLCH1Q4KWH8 1693 aa0.6□□□□□ -2.31
HIF1A-204ENST00000539097 ANAPC1Q9H1A4 1944 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PRUNE2Q8WUY3 3088 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 BCL9O00512 1426 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 IGLV2-18A0A075B6J9 118 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 IGHV3-21A0A0B4J1V1 117 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 DHRS12A0PJE2 317 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 F5H768 121 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 H0YJW9 148 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 LGALS9O00182 355 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 SPAG7O75391 227 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ATP5HO75947 161 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 IGLV3-25P01717 112 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 APOEP02649 317 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 FBP1P09467 338 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 CCL1P22362 96 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ATP6V0CP27449 155 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ERP29P30040 261 aaKnown RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 MIPP30301 263 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 G6PCP35575 357 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 XKP51811 444 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PSMD4P55036 377 aaKnown RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PPP1CAP62136 330 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PABPC1L2AQ5JQF8 200 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 OR10J3Q5JRS4 329 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 BRMS1LQ5PSV4 323 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 IGFL3Q6UXB1 125 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 MARCH3Q86UD3 253 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ZNRF2Q8NHG8 242 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 LRRC20Q8TCA0 184 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ASB13Q8WXK3 278 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 CCL17Q92583 94 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 CMBLQ96DG6 245 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PEBP4Q96S96 227 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PRSS27Q9BQR3 290 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 TXNIPQ9H3M7 391 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 LINC00574Q9H8X3 128 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 CYTL1Q9NRR1 136 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 EMC3Q9P0I2 261 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 RPS6KB2Q9UBS0 482 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 HHLA2Q9UM44 414 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 MYH1P12882 1939 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 UTRNP46939 3433 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 GCN1Q92616 2671 aaKnown RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PATJQ8NI35 1801 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ICE1Q9Y2F5 2266 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 POLA1P09884 1462 aaPredicted RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 TINCRA0A1B0GVN0 87 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ERICH2A1L162 156 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 OR6C6A6NF89 314 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 SIGLEC16A6NMB1 481 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 GYG2O15488 501 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 HPGDSO60760 199 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 DCTN3O75935 186 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 DEXIO95424 95 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 KLF8O95600 359 aaPredicted RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 IGKV1-39P01597 117 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 IGKV1D-39P04432 117 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 FABP3P05413 133 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 HLA-DQB2P05538 268 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 LINC00614P0C842 121 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 P0DMU3 169 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 FAM231AP0DMU4 169 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 FAM231CP0DMU5 169 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 CGB3P0DN86 165 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 CGB7P0DN87 165 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 SCGB1A1P11684 91 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 CELP19835 753 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 CRABP2P29373 138 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 RAP1GDS1P52306 607 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 AP1S1P61966 158 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 RPS23P62266 143 aaKnown RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 RAP1AP62834 184 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ZNHIT3Q15649 155 aaPredicted RBP0.59□□□□□ -2.31
HIF1A-204ENST00000539097 SPIN3Q5JUX0 258 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 SDHAF4Q5VUM1 108 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 FAM231DQ6ZW35 169 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 PLCZ1Q86YW0 608 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 OSR2Q8N2R0 312 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ATPAF2Q8N5M1 289 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 OR4K15Q8NH41 348 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 TWIST2Q8WVJ9 160 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 SMIM12Q96EX1 92 aa0.59□□□□□ -2.31
HIF1A-204ENST00000539097 ADTRPQ96IZ2 230 aa0.59□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms