RNA–Protein interactions for RNA: ENST00000538995.1

RTN3-209, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 814 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-209ENST00000538995 CRYGBP07316 175 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 LUMP51884 338 aaPredicted RBP8.98□□□□□ -0.97
RTN3-209ENST00000538995 FXYD3Q14802 87 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 UNQ5815/PRO19632Q6UWF5 114 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 OR1N2Q8NGR9 330 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 TMEM68Q96MH6 324 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 CLCC1Q96S66 551 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 TPSG1Q9NRR2 321 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 PLA2G2EQ9NZK7 142 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 SPATA2Q9UM82 520 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 A3GALT2U3KPV4 340 aa8.98□□□□□ -0.97
RTN3-209ENST00000538995 SHOXO15266 292 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 AIREO43918 545 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 CREBL2O60519 120 aaPredicted RBP8.97□□□□□ -0.97
RTN3-209ENST00000538995 TUSC2O75896 110 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 LGALS1P09382 135 aaKnown RBP8.97□□□□□ -0.97
RTN3-209ENST00000538995 INSL3P51460 131 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 UBE2KP61086 200 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 GNB1P62873 340 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 DGCR2P98153 550 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 VMA21Q3ZAQ7 101 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 OVCH2Q7RTZ1 564 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 TEX45Q8NA69 505 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 BVESQ8NE79 360 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 LFNGQ8NES3 379 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 OR5H6Q8NGV6 325 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 GRPEL2Q8TAA5 225 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 OSR1Q8TAX0 266 aaPredicted RBP8.97□□□□□ -0.97
RTN3-209ENST00000538995 YIPF6Q96EC8 236 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 FAM103A1Q9BTL3 118 aaKnown RBP8.97□□□□□ -0.97
RTN3-209ENST00000538995 DIABLOQ9NR28 239 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 MRPS7Q9Y2R9 242 aaKnown RBP8.97□□□□□ -0.97
RTN3-209ENST00000538995 PRELID3BQ9Y3B1 194 aa8.97□□□□□ -0.97
RTN3-209ENST00000538995 TRAV18A0A075B6X5 111 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 WI2-2373I1.2A0A1W2PRP0 233 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 TRIM64CA6NLI5 447 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 LINC00473A8K010 186 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 SEC14L6B5MCN3 397 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 ARPC1BO15143 372 aaKnown RBP8.96□□□□□ -0.98
RTN3-209ENST00000538995 CNIH1O95406 144 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 BRI3O95415 125 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 CRYZL1O95825 349 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 NFYAP23511 347 aaPredicted RBP8.96□□□□□ -0.98
RTN3-209ENST00000538995 CBX5P45973 191 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 ARPC4P59998 168 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 SSBP2P81877 361 aaPredicted RBP8.96□□□□□ -0.98
RTN3-209ENST00000538995 MSMO1Q15800 293 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 ASPHD1Q5U4P2 390 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 KCTD9Q7L273 389 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 HOGA1Q86XE5 327 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 POC5Q8NA72 575 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 BEST4Q8NFU0 473 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 HSD17B10Q99714 261 aaKnown RBP8.96□□□□□ -0.98
RTN3-209ENST00000538995 AUNIPQ9H7T9 357 aa8.96□□□□□ -0.98
RTN3-209ENST00000538995 RBMX2Q9Y388 322 aaKnown RBP8.96□□□□□ -0.98
RTN3-209ENST00000538995 SRRM4A7MD48 611 aaKnown RBP8.95□□□□□ -0.98
RTN3-209ENST00000538995 LINC01619G3V211 115 aa8.95□□□□□ -0.98
RTN3-209ENST00000538995 TPPP2P59282 170 aa8.95□□□□□ -0.98
RTN3-209ENST00000538995 UBE2NLQ5JXB2 153 aa8.95□□□□□ -0.98
RTN3-209ENST00000538995 KCTD12Q96CX2 325 aaKnown RBP8.95□□□□□ -0.98
RTN3-209ENST00000538995 OR5B12Q96R08 314 aa8.95□□□□□ -0.98
RTN3-209ENST00000538995 IGKV1D-13A0A0B4J2D9 117 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 A0A0G2JLM5 398 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 OVOL1O14753 267 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 XRCC3O43542 346 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 IGLV2-14P01704 120 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 TRGV3P03979 118 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 IGKV1-13P0DP09 117 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 AADACP22760 399 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 PJVKQ0ZLH3 352 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 EIF4EBP1Q13541 118 aaPredicted RBP8.94□□□□□ -0.98
RTN3-209ENST00000538995 CDK10Q15131 360 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 PRSS8Q16651 343 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 ZNF66Q6ZN08 573 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 ZNF429Q86V71 674 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 OR4S2Q8NH73 311 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 CASTOR1Q8WTX7 329 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 SLC25A46Q96AG3 418 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 S100A16Q96FQ6 103 aaKnown RBP8.94□□□□□ -0.98
RTN3-209ENST00000538995 RHOVQ96L33 236 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 SCOCQ9UIL1 159 aa8.94□□□□□ -0.98
RTN3-209ENST00000538995 FCGR3BO75015 233 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 HSPB1P04792 205 aaKnown RBP8.93□□□□□ -0.98
RTN3-209ENST00000538995 SAA1P0DJI8 122 aaPredicted RBP8.93□□□□□ -0.98
RTN3-209ENST00000538995 RPS19P39019 145 aaKnown RBP8.93□□□□□ -0.98
RTN3-209ENST00000538995 KIR2DS2P43631 304 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 MRGPRG-AS1Q2M3A8 158 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 GVQW1Q8N7I0 195 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 ZBTB34Q8NCN2 500 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 OR13F1Q8NGS4 319 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 VSTM2AQ8TAG5 236 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 TCTEX1D2Q8WW35 142 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 DCUN1D4Q92564 292 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 MS4A10Q96PG2 267 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 ALX4Q9H161 411 aaPredicted RBP8.93□□□□□ -0.98
RTN3-209ENST00000538995 ANAPC10Q9UM13 185 aa8.93□□□□□ -0.98
RTN3-209ENST00000538995 IGHV4OR15-8A0A075B7B6 117 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 A0A087WW49 117 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 C13orf42A0A1B0GVH6 325 aa8.92□□□□□ -0.98
RTN3-209ENST00000538995 J3QRK9 145 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 152.6 ms