RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 TCRBP04435 133 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 IGKV1-13P0DP09 117 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 SLC6A1P30531 599 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 UBE2E1P51965 193 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 UCP3P55916 312 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 HABP2Q14520 560 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 SURF2Q15527 256 aaPredicted RBP9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 LY6EQ16553 131 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 PLA1AQ53H76 456 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 AADACL3Q5VUY0 350 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 NRARPQ7Z6K4 114 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 TMED4Q7Z7H5 227 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 Q8N2B8 174 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 CENPSQ8N2Z9 138 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 LINC00311Q8N616 119 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 ZBTB34Q8NCN2 500 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF439Q8NDP4 499 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 OR11H6Q8NGC7 330 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 OR13C8Q8NGS7 320 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 PIFOQ8TCI5 191 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 RPEQ96AT9 228 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 SSX3Q99909 188 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 C20orf85Q9H1P6 137 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF702PQ9H963 129 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 PCLOQ9Y6V0 5065 aa9.96□□□□□ -0.82
CLSTN3-208ENST00000538933 HERC2O95714 4834 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 SAA2-SAA4A0A096LPE2 208 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 LCE6AA0A183 80 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 LEUTXA8MZ59 168 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 M0R1X1 148 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 CTSDP07339 412 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 H2AFB2P0C5Z0 115 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 SAA2P0DJI9 122 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 PI3P19957 117 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 BTCP35070 178 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 ARHGDIBP52566 201 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF134P52741 427 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 TAS2R31P59538 309 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 CATR1Q13166 79 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 PHLDA2Q53GA4 152 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 UTF1Q5T230 341 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF626Q68DY1 528 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 TGIF2LXQ8IUE1 241 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF486Q96H40 463 aaPredicted RBP9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 AKR1E2Q96JD6 320 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 WNT10AQ9GZT5 417 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 IFI27L2Q9H2X8 130 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 NUDT15Q9NV35 164 aa9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 TBL2Q9Y4P3 447 aaKnown RBP9.95□□□□□ -0.82
CLSTN3-208ENST00000538933 TEX13DA0A0J9YY54 714 aaPredicted RBP9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 BUB1B-PAK6H3BSN5 160 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 TNFSF12O43508 249 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 IGLV1-47P01700 117 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 AKR1C4P17516 323 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 HOXD3P31249 432 aaPredicted RBP9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 REG1BP48304 166 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 PIGPP57054 158 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 RPL39P5Q59GN2 51 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 MINOS1Q5TGZ0 78 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 ZNF818PQ6ZRF7 136 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 DRAM1Q8N682 238 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 MINDY2Q8NBR6 621 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 OR4P4Q8NGL7 312 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 RCC1LQ96I51 464 aaKnown RBP9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 RSRP1Q9BUV0 290 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 MEGF9Q9H1U4 602 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 SDHAF2Q9NX18 166 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 DPM3Q9P2X0 92 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 GPR132Q9UNW8 380 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 VSIG4Q9Y279 399 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 MINOS1-NBL1R4GNA1 71 aa9.94□□□□□ -0.82
CLSTN3-208ENST00000538933 ODF3BA8MYP8 253 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 TXNL1O43396 289 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 GAPDHP04406 335 aaKnown RBP9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 GNRHRP30968 328 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 RAB25P57735 213 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 CD83Q01151 205 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 CBX3Q13185 183 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 MSMO1Q15800 293 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 AANATQ16613 207 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 HCP5Q6MZN7 132 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 CCDC144NLQ6NUI1 221 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 FAM71F2Q6NXP2 309 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 KCTD9Q7L273 389 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 SGPP2Q8IWX5 399 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 DUSP18Q8NEJ0 188 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 OR51H1Q8NH63 302 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 TCTEX1D2Q8WW35 142 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 AGMATQ9BSE5 352 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 NPFFR1Q9GZQ6 430 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 RAB18Q9NP72 206 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 SLC2A9Q9NRM0 540 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 FLVCR2Q9UPI3 526 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 PRELID3BQ9Y3B1 194 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 HILPDAQ9Y5L2 63 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 RYR1P21817 5038 aa9.93□□□□□ -0.82
CLSTN3-208ENST00000538933 INMT-MINDY4F8WBC2 141 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 DHFRP00374 187 aa9.92□□□□□ -0.82
CLSTN3-208ENST00000538933 APOA2P02652 100 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms