RNA–Protein interactions for RNA: ENST00000538545.6

ACTN1-205, Transcript of actinin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene ACTN1, Length 2,813 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-205ENST00000538545 HSD17B10Q99714 261 aaKnown RBP11.59□□□□□ -0.55
ACTN1-205ENST00000538545 hADV38S2A0JD32 116 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 OPN1MWP04001 364 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 IGKV1-16P04430 117 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 P0C879 139 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 OPN1MW2P0DN77 364 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 OPN1MW3P0DN78 364 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 TNFRSF9Q07011 255 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 ZNF439Q8NDP4 499 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 ZFP57Q9NU63 452 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 LRRK2Q5S007 2527 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 NAV3Q8IVL0 2385 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 GAPDHP04406 335 aaKnown RBP11.58□□□□□ -0.56
ACTN1-205ENST00000538545 WNT2P09544 360 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 ZNF616Q08AN1 781 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 ZNF66Q6ZN08 573 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 BPIFCQ8NFQ6 507 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 ITLN2Q8WWU7 325 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-205ENST00000538545 ZNF714Q96N38 554 aa11.58□□□□□ -0.56
ACTN1-205ENST00000538545 SEBOXQ9HB31 216 aaPredicted RBP11.58□□□□□ -0.56
ACTN1-205ENST00000538545 RPUSD1Q9UJJ7 312 aaKnown RBP11.58□□□□□ -0.56
ACTN1-205ENST00000538545 ZNF729A6NN14 1252 aaPredicted RBP11.57□□□□□ -0.56
ACTN1-205ENST00000538545 A8MXK9 166 aa11.57□□□□□ -0.56
ACTN1-205ENST00000538545 RSG1Q9BU20 258 aa11.57□□□□□ -0.56
ACTN1-205ENST00000538545 TMA7Q9Y2S6 64 aaKnown RBP11.57□□□□□ -0.56
ACTN1-205ENST00000538545 LINC00312Q9Y6C7 94 aa11.57□□□□□ -0.56
ACTN1-205ENST00000538545 LRRC10Q5BKY1 277 aa11.57□□□□□ -0.56
ACTN1-205ENST00000538545 SSX8Q7RTT4 187 aa11.57□□□□□ -0.56
ACTN1-205ENST00000538545 LRRC20Q8TCA0 184 aa11.57□□□□□ -0.56
ACTN1-205ENST00000538545 S1PR3Q99500 378 aa11.57□□□□□ -0.56
ACTN1-205ENST00000538545 BORCS7-ASMTA0A0B4J1R7 106 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 TOR1AO14656 332 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 PAX6P26367 422 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 SULT1A2P50226 295 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 RPL23AP62750 156 aaKnown RBP11.56□□□□□ -0.56
ACTN1-205ENST00000538545 POLQO75417 2590 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 PRH1P02810 166 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 RNF224P0DH78 156 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 SPP1P10451 314 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 OR4C12Q96R67 309 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 GINS3Q9BRX5 216 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 TMEM204Q9BSN7 226 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 SLC25A31Q9H0C2 315 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 FBXO7Q9Y3I1 522 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 DOPEY1Q5JWR5 2465 aa11.56□□□□□ -0.56
ACTN1-205ENST00000538545 RAB29O14966 203 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 APOC3P02656 99 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 SFTPCP11686 197 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 ATRAIDQ6UW56 229 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 OR2G3Q8NGZ4 309 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 DDB2Q92466 427 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 MARC2Q969Z3 335 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 ARV1Q9H2C2 271 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 SRRM4A7MD48 611 aaKnown RBP11.55□□□□□ -0.56
ACTN1-205ENST00000538545 IFNA17P01571 189 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 CT45A6P0DMU7 189 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 CT45A5P0DMU8 189 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 CT45A7P0DMV0 189 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 SLC25A6P12236 298 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 HSD17B13Q7Z5P4 300 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-205ENST00000538545 CCDC28AQ8IWP9 274 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 CORO2AQ92828 525 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 FAM122AQ96E09 287 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 LRRC46Q96FV0 321 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 RAB40CQ96S21 281 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 CTNNBIP1Q9NSA3 81 aaPredicted RBP11.55□□□□□ -0.56
ACTN1-205ENST00000538545 MED9Q9NWA0 146 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 WSB1Q9Y6I7 421 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 CEBPZOSA8MTT3 80 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 SULT1A1P50225 295 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 SLC25A48Q6ZT89 311 aaKnown RBP11.55□□□□□ -0.56
ACTN1-205ENST00000538545 STX12Q86Y82 276 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 THNSL2Q86YJ6 484 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 FAM213BQ8TBF2 198 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 SMIM8Q96KF7 97 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 UBTD1Q9HAC8 227 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 TMEM140Q9NV12 185 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
ACTN1-205ENST00000538545 IGHV3-72A0A0B4J1Y9 119 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 C9JQL5 133 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 GPR37O15354 613 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 HPRT1P00492 218 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 C11orf42Q8N5U0 333 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 DTD1Q8TEA8 209 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 RHOVQ96L33 236 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 MRPL20Q9BYC9 149 aaKnown RBP11.54□□□□□ -0.56
ACTN1-205ENST00000538545 VSIRQ9H7M9 311 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 PPIHO43447 177 aaKnown RBP11.54□□□□□ -0.56
ACTN1-205ENST00000538545 ADCYAP1P18509 176 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 EIF5AP63241 154 aaKnown RBP11.54□□□□□ -0.56
ACTN1-205ENST00000538545 SLC25A24Q6NUK1 477 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 HEPN1Q6WQI6 88 aa11.54□□□□□ -0.56
ACTN1-205ENST00000538545 NUPL2O15504 423 aaKnown RBP11.53□□□□□ -0.56
ACTN1-205ENST00000538545 CAMLGP49069 296 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 RAB7AP51149 207 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 MSMO1Q15800 293 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 LILRB2Q8N423 598 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 HINT2Q9BX68 163 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 GAL3ST2Q9H3Q3 398 aa11.53□□□□□ -0.56
ACTN1-205ENST00000538545 CACFD1Q9UGQ2 172 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms