RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 CT45A6P0DMU7 189 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CT45A5P0DMU8 189 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CT45A7P0DMV0 189 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 UCP1P25874 307 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SAA4P35542 130 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RPL30P62888 115 aaKnown RBP8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 TMEM187Q14656 261 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 PLGLAQ15195 96 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 FCN2Q15485 313 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ANKRD55Q3KP44 614 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RUSC1-AS1Q66K80 236 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 DHRS7BQ6IAN0 325 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 BRD3OSQ6XYD6 125 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 H2BFWTQ7Z2G1 175 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 LHFPL4Q7Z7J7 247 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 AKAP14Q86UN6 197 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 ODF3L1Q8IXM7 274 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 OR8H3Q8N146 312 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CIARTQ8N365 385 aaPredicted RBP8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 OR4P4Q8NGL7 312 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 RBPMSQ93062 196 aaKnown RBP8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 R3HDM4Q96D70 268 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 C18orf12Q96KH6 178 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SPIN2AQ99865 258 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 SPIN2BQ9BPZ2 258 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 CSMD1Q96PZ7 3565 aa8.65□□□□□ -1.02
TNFRSF1A-211ENST00000538363 DUXBA0A1W2PPF3 345 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ODF3BA8MYP8 253 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CCSO14618 274 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SNAPC5O75971 98 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SCGB1D2O95969 90 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 IGLV2-14P01704 120 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 FAM106CPP0CH98 169 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 NQO2P16083 231 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LINC00205P59089 165 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 BPIFB3P59826 476 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SUPT4H1P63272 117 aaKnown RBP8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CYCSP99999 105 aaKnown RBP8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CD83Q01151 205 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 HNF4GQ14541 408 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 VMA21Q3ZAQ7 101 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 HCP5Q6MZN7 132 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SSX9Q7RTT3 188 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 PDPNQ86YL7 162 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SELENOHQ8IZQ5 122 aaKnown RBP8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CADM3Q8N126 398 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ZNF383Q8NA42 475 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OR4A16Q8NH70 328 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OR1S1Q8NH92 325 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 GLYATL2Q8WU03 294 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 IL22RA2Q969J5 263 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 NABP2Q9BQ15 211 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ZNF251Q9BRH9 671 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RAB18Q9NP72 206 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 KIAA1456Q9P272 454 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 NUP50Q9UKX7 468 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TMED3Q9Y3Q3 217 aa8.64□□□□□ -1.03
TNFRSF1A-211ENST00000538363 A0A0B4J293 547 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 BTBD17A6NE02 478 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 WRBO00258 174 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TIMM23O14925 209 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RBFOX2O43251 390 aaKnown RBP eCLIP8.63□□□□□ -1.032e-7■■■■□ 22.6
TNFRSF1A-211ENST00000538363 CD5LO43866 347 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ADAP1O75689 374 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 S1PR2O95136 353 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SIX6O95475 246 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CDS2O95674 445 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 FBP1P09467 338 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CD99P14209 185 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 G6PCP35575 357 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ZNF137PP52743 207 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SCGB2A2Q13296 93 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 DIAPH2-AS1Q14236 149 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SMCO1Q147U7 214 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 GGNBP1Q5YKI7 109 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 LYZL2Q7Z4W2 148 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SLC35G3Q8N808 338 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OR4C13Q8NGP0 309 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 OR2T10Q8NGZ9 312 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ST6GALNAC6Q969X2 333 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 C5orf30Q96GV9 206 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SEC22AQ96IW7 307 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 HARBI1Q96MB7 349 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 CLCC1Q96S66 551 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TSNAXQ99598 290 aaKnown RBP8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RANBP3Q9H6Z4 567 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 PLEKHA2Q9HB19 425 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 FAM212BQ9NTI7 297 aaPredicted RBP8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 WNK2Q9Y3S1 2297 aa8.63□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ITPR3Q14573 2671 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 NCBP2LA6PVI3 153 aaKnown RBP8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 H0YJW9 148 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RAMP3O60896 148 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 ACTL6BO94805 426 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 RLN2P04090 185 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TRAPPC2P0DI81 140 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 TRAPPC2BP0DI82 140 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SULT1A3P0DMM9 295 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 SULT1A4P0DMN0 295 aa8.62□□□□□ -1.03
TNFRSF1A-211ENST00000538363 IGHV4-38-2P0DP08 117 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms