RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 ATP6V1FQ16864 119 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 KHDC3LQ587J8 217 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 AVPI1Q5T686 147 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 TGIF2LYQ8IUE0 185 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 DDB2Q92466 427 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 UNKLQ9H9P5 680 aaKnown RBP11.58□□□□□ -0.56
LIMK1-208ENST00000538333 GFOD1Q9NXC2 390 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 TET2Q6N021 2002 aaPredicted RBP11.58□□□□□ -0.56
LIMK1-208ENST00000538333 KBTBD11-OT1A0A1B0GTJ5 212 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 LOC102723971A0A1B0GUV8 181 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 THBDP07204 575 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 FOLR2P14207 255 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 DAOP14920 347 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 TNFSF4P23510 183 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 FOXC1Q12948 553 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 TBR1Q16650 682 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 TMEM41BQ5BJD5 291 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 GFRALQ6UXV0 394 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 ZNF788Q6ZQV5 615 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 HIST1H2BAQ96A08 127 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 PINX1Q96BK5 328 aaKnown RBP11.58□□□□□ -0.56
LIMK1-208ENST00000538333 TMEM147Q9BVK8 224 aa11.58□□□□□ -0.56
LIMK1-208ENST00000538333 QTRT1Q9BXR0 403 aaKnown RBP11.58□□□□□ -0.56
LIMK1-208ENST00000538333 MAP1BP46821 2468 aaKnown RBP11.58□□□□□ -0.56
LIMK1-208ENST00000538333 RBMXL2O75526 392 aaKnown RBP11.57□□□□□ -0.56
LIMK1-208ENST00000538333 FBP1P09467 338 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 VWC2Q2TAL6 325 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 SPINK9Q5DT21 86 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 CT45A1Q5HYN5 189 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 TEX36Q5VZQ5 186 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 ZNF787Q6DD87 383 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 CYB561D1Q8N8Q1 229 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 CT45A3Q8NHU0 189 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 FAM234AQ9H0X4 552 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 ZNF665Q9H7R5 613 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 DCAF16Q9NXF7 216 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 IGKV1D-33P01593 117 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 IGKV1-33P01594 117 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 RAB7AP51149 207 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 ADIPOQQ15848 244 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 LCN15Q6UWW0 184 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 WFDC8Q8IUA0 241 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 DEFB108BQ8NET1 73 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 OR10P1Q8NGE3 313 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 OR10G4Q8NGN3 311 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 LEAP2Q969E1 77 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 LINC00574Q9H8X3 128 aa11.57□□□□□ -0.56
LIMK1-208ENST00000538333 PUS1Q9Y606 427 aaKnown RBP eCLIP11.57□□□□□ -0.56
LIMK1-208ENST00000538333 C15orf62A8K5M9 175 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 CEBPZOSA8MTT3 80 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 K7ENP7 123 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 MDKP21741 143 aaPredicted RBP11.56□□□□□ -0.56
LIMK1-208ENST00000538333 OR2B8PP59922 312 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 GNB2P62879 340 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 BSPH1Q075Z2 132 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 RPP25LQ8N5L8 163 aaKnown RBP11.56□□□□□ -0.56
LIMK1-208ENST00000538333 FAM216BQ8N7L0 139 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 ZNF439Q8NDP4 499 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 ISOC2Q96AB3 205 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 SNRNP40Q96DI7 357 aaKnown RBP11.56□□□□□ -0.56
LIMK1-208ENST00000538333 PCNX1Q96RV3 2341 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 CCL13Q99616 98 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 ZNF251Q9BRH9 671 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 SCNM1Q9BWG6 230 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 RAB9BQ9NP90 201 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 GNG13Q9P2W3 67 aa11.56□□□□□ -0.56
LIMK1-208ENST00000538333 TRGV10A0A0A0MS01 117 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 H3BQ15 152 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 GYPAP02724 150 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 BCL2P10415 239 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 KIR2DS2P43631 304 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 RAB13P51153 203 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 ELLP55199 621 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-208ENST00000538333 PDLIM3Q53GG5 364 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-208ENST00000538333 PRR30Q53SZ7 412 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-208ENST00000538333 ACSM6Q6P461 480 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 ZNF436-AS1Q8NC38 126 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-208ENST00000538333 S1PR3Q99500 378 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 CISD1Q9NZ45 108 aaKnown RBP11.55□□□□□ -0.56
LIMK1-208ENST00000538333 SH3BGRL2Q9UJC5 107 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 SAA2-SAA4A0A096LPE2 208 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 A0A1W2PPE3 182 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 NDUFA2O43678 99 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 MT-ND4LP03901 98 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 ARG1P05089 322 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 OR4A8P0C604 315 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 SAA2P0DJI9 122 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-208ENST00000538333 FGF8P55075 233 aaPredicted RBP11.55□□□□□ -0.56
LIMK1-208ENST00000538333 CCL8P80075 99 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 RELBQ01201 579 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 PRAMEF5Q5TYX0 476 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 SSX9Q7RTT3 188 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 VKORC1L1Q8N0U8 176 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 OR52E5Q8NH55 327 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 CORO2AQ92828 525 aa11.55□□□□□ -0.56
LIMK1-208ENST00000538333 SMG1Q96Q15 3661 aaKnown RBP11.55□□□□□ -0.56
LIMK1-208ENST00000538333 A0A1W2PPE2 198 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 A0A1W2PPH5 198 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 MAP1LC3B2A6NCE7 125 aa11.54□□□□□ -0.56
LIMK1-208ENST00000538333 C17orf100A8MU93 164 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms