RNA–Protein interactions for RNA: ENST00000536483.1

PRKDC-207, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 834 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-207ENST00000536483 SPATA2Q9UM82 520 aa9.71□□□□□ -0.86
PRKDC-207ENST00000536483 SMIM30A4D0T7 59 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 BET1O15155 118 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 APOA1P02647 267 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 IGKV1-16P04430 117 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 NHLRC4P0CG21 123 aaPredicted RBP9.7□□□□□ -0.86
PRKDC-207ENST00000536483 VDAC1P21796 283 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 LGALS7P47929 136 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 RAB25P57735 213 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 CX3CL1P78423 397 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 RUNX1Q01196 453 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 CXorf66Q5JRM2 361 aaPredicted RBP9.7□□□□□ -0.86
PRKDC-207ENST00000536483 ZNF562Q6V9R5 426 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 GLDNQ6ZMI3 551 aaPredicted RBP9.7□□□□□ -0.86
PRKDC-207ENST00000536483 LYSMD2Q8IV50 215 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 TCTEX1D1Q8N7M0 179 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 RAX2Q96IS3 184 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 CMTM3Q96MX0 182 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 TSNAXQ99598 290 aaKnown RBP9.7□□□□□ -0.86
PRKDC-207ENST00000536483 SDHAF2Q9NX18 166 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 ZMAT5Q9UDW3 170 aaKnown RBP9.7□□□□□ -0.86
PRKDC-207ENST00000536483 NUBP2Q9Y5Y2 271 aa9.7□□□□□ -0.86
PRKDC-207ENST00000536483 CCL24O00175 119 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 CTDSP2O14595 271 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 SSX5O60225 188 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 RAMP3O60896 148 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 SLC22A5O76082 557 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 HLA-DQB1P01920 261 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 RPLP1P05386 114 aaKnown RBP9.69□□□□□ -0.86
PRKDC-207ENST00000536483 CRYGBP07316 175 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 OR8U9P0C7N5 309 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 EGR2P11161 476 aaPredicted RBP9.69□□□□□ -0.86
PRKDC-207ENST00000536483 LUMP51884 338 aaPredicted RBP9.69□□□□□ -0.86
PRKDC-207ENST00000536483 MXD1Q05195 221 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 PSG5Q15238 335 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 AKIRIN2Q53H80 203 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 TMEM177Q53S58 311 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 CNIH2Q6PI25 160 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 OR5H6Q8NGV6 325 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 OR8U1Q8NH10 309 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 MAFIPQ8WZ33 124 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 DDB2Q92466 427 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 C5orf30Q96GV9 206 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 ADTRPQ96IZ2 230 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 UBE2E2Q96LR5 201 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 U3KQK5 164 aa9.69□□□□□ -0.86
PRKDC-207ENST00000536483 HUWE1Q7Z6Z7 4374 aaKnown RBP9.69□□□□□ -0.86
PRKDC-207ENST00000536483 TRAV41A0A0B4J266 112 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 TMEM235A6NFC5 223 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 H7C2Y5 167 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 M0R1X1 148 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 FCN1O00602 326 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 ATP6V0E1O15342 81 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 RGS5O15539 181 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 TUSC2O75896 110 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 BRI3O95415 125 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 IGLV2-23P01705 113 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 APOA2P02652 100 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 RRASP10301 218 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 LINC00205P59089 165 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 NDPQ00604 133 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 FHL3Q13643 280 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 MSMO1Q15800 293 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 DEFB136Q30KP8 78 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 LCNL1Q6ZST4 164 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 DRAXINQ8NBI3 349 aaPredicted RBP9.68□□□□□ -0.86
PRKDC-207ENST00000536483 C4orf3Q8WVX3 66 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 FLYWCH2Q96CP2 140 aaKnown RBP9.68□□□□□ -0.86
PRKDC-207ENST00000536483 PRR25Q96S07 402 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 OR2D2Q9H210 308 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 FBXL15Q9H469 300 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 ANXA10Q9UJ72 324 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 OR2W1Q9Y3N9 320 aa9.68□□□□□ -0.86
PRKDC-207ENST00000536483 LSM4Q9Y4Z0 139 aaKnown RBP9.68□□□□□ -0.86
PRKDC-207ENST00000536483 FABP12A6NFH5 140 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 G3V318 75 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 XRCC3O43542 346 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 DUTP33316 252 aaKnown RBP9.67□□□□□ -0.86
PRKDC-207ENST00000536483 BCAP31P51572 246 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 GNG2P59768 71 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 IFITM3Q01628 133 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 TMEM267Q0VDI3 215 aaPredicted RBP9.67□□□□□ -0.86
PRKDC-207ENST00000536483 IDNKQ5T6J7 187 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 HOGA1Q86XE5 327 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 ZNF491Q8N8L2 437 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 NUDCD2Q8WVJ2 157 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 ASCL2Q99929 193 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 SOSTQ9BQB4 213 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 GINS4Q9BRT9 223 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 ST6GALNAC5Q9BVH7 336 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 SRRQ9GZT4 340 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 KLK15Q9H2R5 256 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 AUNIPQ9H7T9 357 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 DIABLOQ9NR28 239 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 SLC35D1Q9NTN3 355 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 FBXO7Q9Y3I1 522 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 RYR2Q92736 4967 aa9.67□□□□□ -0.86
PRKDC-207ENST00000536483 TRAV18A0A075B6X5 111 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 I3L521 148 aa9.66□□□□□ -0.86
PRKDC-207ENST00000536483 TPPPO94811 219 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms