RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 MDFIC2A0A1B0GVS7 189 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 C7orf66A4D0T2 115 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 SNRPGP15A8MWD9 76 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 CREBL2O60519 120 aaPredicted RBP9.26□□□□□ -0.93
CDCA3-206ENST00000536241 B3GALNT1O75752 331 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 CDS2O95674 445 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 CRYZL1O95825 349 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 HPRT1P00492 218 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 IGKV1-39P01597 117 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 APOA2P02652 100 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 IGKV1D-39P04432 117 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 FBP1P09467 338 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 RRASP10301 218 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 CD1BP29016 333 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 BRS3P32247 399 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 KIR2DS2P43631 304 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 RPS16P62249 146 aaKnown RBP9.26□□□□□ -0.93
CDCA3-206ENST00000536241 HABP2Q14520 560 aaPredicted RBP9.26□□□□□ -0.93
CDCA3-206ENST00000536241 HNF4GQ14541 408 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 RTL8BQ17RB0 113 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 LIAT1Q6ZQX7 453 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 ZNF695Q8IW36 515 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 SELENOHQ8IZQ5 122 aaKnown RBP9.26□□□□□ -0.93
CDCA3-206ENST00000536241 C12orf45Q8N5I9 185 aaPredicted RBP9.26□□□□□ -0.93
CDCA3-206ENST00000536241 LHFPL5Q8TAF8 219 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 MITD1Q8WV92 249 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 FLYWCH2Q96CP2 140 aaKnown RBP9.26□□□□□ -0.93
CDCA3-206ENST00000536241 SSX3Q99909 188 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 OR51J1Q9H342 316 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 TMEM160Q9NX00 188 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 WASHC3Q9Y3C0 194 aa9.26□□□□□ -0.93
CDCA3-206ENST00000536241 SVEP1Q4LDE5 3571 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 hCG_2014768A0A024R1R8 64 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 FAM90A9PA6NNJ1 464 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 SRRM4A7MD48 611 aaKnown RBP9.25□□□□□ -0.93
CDCA3-206ENST00000536241 S1PR2O95136 353 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 VENTXO95231 258 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 IGKV1D-33P01593 117 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 IGKV1-33P01594 117 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 SNRNP70P08621 437 aaKnown RBP9.25□□□□□ -0.93
CDCA3-206ENST00000536241 RPA2P15927 270 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 HNF1AP20823 631 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 HES1Q14469 280 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 FBLN7Q53RD9 439 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 TMEM268Q5VZI3 342 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 C9orf139Q6ZV77 190 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 PDPNQ86YL7 162 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 LGI3Q8N145 548 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 COQ8AQ8NI60 647 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 PIFOQ8TCI5 191 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 TMEM56Q96MV1 263 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 PHB2Q99623 299 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 FAM212BQ9NTI7 297 aaPredicted RBP9.25□□□□□ -0.93
CDCA3-206ENST00000536241 TMEM56-RWDD3S4R434 201 aa9.25□□□□□ -0.93
CDCA3-206ENST00000536241 CELSR1Q9NYQ6 3014 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 SHOXO15266 292 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 RBFOX2O43251 390 aaKnown RBP eCLIP9.24□□□□□ -0.93
CDCA3-206ENST00000536241 SSNA1O43805 119 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 KRASP01116 189 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 G6PCP35575 357 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 ARHGDIBP52566 201 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 TMEM177Q53S58 311 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 SSX9Q7RTT3 188 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 LYZL2Q7Z4W2 148 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 THNSL2Q86YJ6 484 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 VKORC1L1Q8N0U8 176 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 OR4C13Q8NGP0 309 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 OR4S2Q8NH73 311 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 RBPMSQ93062 196 aaKnown RBP9.24□□□□□ -0.93
CDCA3-206ENST00000536241 ZDHHC16Q969W1 377 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 EAF1Q96JC9 268 aaPredicted RBP9.24□□□□□ -0.93
CDCA3-206ENST00000536241 ZNF48Q96MX3 618 aaPredicted RBP9.24□□□□□ -0.93
CDCA3-206ENST00000536241 PLEKHA2Q9HB19 425 aa9.24□□□□□ -0.93
CDCA3-206ENST00000536241 SONP18583 2426 aaKnown RBP9.24□□□□□ -0.93
CDCA3-206ENST00000536241 A0A0B4J2A0 478 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 VGLL3A8MV65 326 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 ADAP1O75689 374 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 MOSP00540 346 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 HOXB5P09067 269 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 FAM106CPP0CH98 169 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 CNTFRP26992 372 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 F2RL1P55085 397 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 EBI3Q14213 229 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 C2orf68Q2NKX9 166 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 DHRS7BQ6IAN0 325 aaPredicted RBP9.23□□□□□ -0.93
CDCA3-206ENST00000536241 SLC35G3Q8N808 338 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 LRTM2Q8N967 370 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 OR2T10Q8NGZ9 312 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 R3HDM4Q96D70 268 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 SEC22AQ96IW7 307 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 SHPKQ9UHJ6 478 aa9.23□□□□□ -0.93
CDCA3-206ENST00000536241 DBX1A6NMT0 343 aa9.22□□□□□ -0.93
CDCA3-206ENST00000536241 INAFM1C9JVW0 142 aa9.22□□□□□ -0.93
CDCA3-206ENST00000536241 HRASP01112 189 aa9.22□□□□□ -0.93
CDCA3-206ENST00000536241 NQO2P16083 231 aa9.22□□□□□ -0.93
CDCA3-206ENST00000536241 LGALS7P47929 136 aa9.22□□□□□ -0.93
CDCA3-206ENST00000536241 DYNLT3P51808 116 aa9.22□□□□□ -0.93
CDCA3-206ENST00000536241 SRPXP78539 464 aa9.22□□□□□ -0.93
CDCA3-206ENST00000536241 IZUMO4Q1ZYL8 232 aa9.22□□□□□ -0.93
CDCA3-206ENST00000536241 LRRC75BQ2VPJ9 315 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms