RNA–Protein interactions for RNA: ENST00000535967.5

DDB1-207, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 1,404 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-207ENST00000535967 SLC35D1Q9NTN3 355 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 LIN7CQ9NUP9 197 aaKnown RBP10.07□□□□□ -0.8
DDB1-207ENST00000535967 ANKRD20A5PA0PJZ0 165 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 J3QRK9 145 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 M0QYG6 137 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 NDUFA3O95167 84 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 SPDEFO95238 335 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 RAB3DO95716 219 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 AMY1AP04745 511 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 AMY2AP04746 511 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 AKAIN1P0CW23 69 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 CATR1Q13166 79 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 EIF4EBP1Q13541 118 aaPredicted RBP10.07□□□□□ -0.8
DDB1-207ENST00000535967 MMDQ15546 238 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 CNPY1Q3B7I2 92 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 PYDC2Q56P42 97 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 STEAP1BQ6NZ63 245 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 LPCAT3Q6P1A2 487 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 FAM71E2Q8N5Q1 922 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 DRAXINQ8NBI3 349 aaPredicted RBP10.07□□□□□ -0.8
DDB1-207ENST00000535967 NPBQ8NG41 125 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 WFDC12Q8WWY7 111 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 DEDD2Q8WXF8 326 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 PTTG2Q9NZH5 202 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 PRELID3BQ9Y3B1 194 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 RNF114Q9Y508 228 aa10.07□□□□□ -0.8
DDB1-207ENST00000535967 NCBP2LA6PVI3 153 aaKnown RBP10.06□□□□□ -0.8
DDB1-207ENST00000535967 LINC00473A8K010 186 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 NBR2O15453 112 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 KIR2DS2P43631 304 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 UCP3P55916 312 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 KRTAP10-3P60369 221 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 ABCA11PQ4W5N1 156 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 ZNF818PQ6ZRF7 136 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 Q8N402 240 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 Q8N9W7 124 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 BVESQ8NE79 360 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 TRIM63Q969Q1 353 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 TSNAXQ99598 290 aaKnown RBP10.06□□□□□ -0.8
DDB1-207ENST00000535967 TINAGL1Q9GZM7 467 aaPredicted RBP10.06□□□□□ -0.8
DDB1-207ENST00000535967 SRRQ9GZT4 340 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 MRPL18Q9H0U6 180 aaKnown RBP10.06□□□□□ -0.8
DDB1-207ENST00000535967 CCL28Q9NRJ3 127 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 PLSCR3Q9NRY6 295 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 KIAA1456Q9P272 454 aa10.06□□□□□ -0.8
DDB1-207ENST00000535967 NOTCH3Q9UM47 2321 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 F8W735 103 aaPredicted RBP10.05□□□□□ -0.8
DDB1-207ENST00000535967 FAUP35544 74 aaKnown RBP10.05□□□□□ -0.8
DDB1-207ENST00000535967 ECI1P42126 302 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 PROK1P58294 105 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 AP3S2P59780 193 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 BLCAPP62952 87 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 ZNF45Q02386 682 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 TMEM177Q53S58 311 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 LHFPL1Q86WI0 220 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 GDPD1Q8N9F7 314 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 OSR1Q8TAX0 266 aaPredicted RBP10.05□□□□□ -0.8
DDB1-207ENST00000535967 TCTEX1D2Q8WW35 142 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 FLYWCH2Q96CP2 140 aaKnown RBP10.05□□□□□ -0.8
DDB1-207ENST00000535967 RASL11BQ9BPW5 248 aa10.05□□□□□ -0.8
DDB1-207ENST00000535967 THAP7Q9BT49 309 aaPredicted RBP10.05□□□□□ -0.8
DDB1-207ENST00000535967 DISC1C4P0D8 188 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 GPR31O00270 319 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 FBXO24O75426 580 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 HLA-DRB1P01911 266 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 IGKV1-16P04430 117 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 S100GP29377 79 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 VDAC2P45880 294 aaPredicted RBP10.04□□□□□ -0.8
DDB1-207ENST00000535967 LGALS7P47929 136 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 F2RL1P55085 397 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 LINC00205P59089 165 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 AADACL3Q5VUY0 350 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 CMTM1Q8IZ96 169 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 SLC38A6Q8IZM9 456 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 MFSD4AQ8N468 514 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 OR4D10Q8NGI6 311 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 OR4C16Q8NGL9 310 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 OR4S2Q8NH73 311 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 ZNF486Q96H40 463 aaPredicted RBP10.04□□□□□ -0.8
DDB1-207ENST00000535967 HARBI1Q96MB7 349 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 RSRP1Q9BUV0 290 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 SERTAD4Q9NUC0 356 aa10.04□□□□□ -0.8
DDB1-207ENST00000535967 RRHO14718 337 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 RBFOX2O43251 390 aaKnown RBP eCLIP10.03□□□□□ -0.8
DDB1-207ENST00000535967 IGHG2P01859 326 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 CNTFRP26992 372 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 GNRHRP30968 328 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 RPS16P62249 146 aaKnown RBP10.03□□□□□ -0.8
DDB1-207ENST00000535967 C5orf64Q2M2E5 130 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 C9orf152Q5JTZ5 239 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 SLC35E3Q7Z769 313 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 C1QL4Q86Z23 238 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 TOMM5Q8N4H5 51 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 TCTEX1D1Q8N7M0 179 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 TERB2Q8NHR7 220 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 PRRT1Q99946 306 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 CITED1Q99966 193 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 SLC2A8Q9NY64 477 aa10.03□□□□□ -0.8
DDB1-207ENST00000535967 TET2Q6N021 2002 aaPredicted RBP10.02□□□□□ -0.81
DDB1-207ENST00000535967 SHOXO15266 292 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms